| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2263 |
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| Symbol | |
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| ID | 5371404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2696364 |
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| End bp | 2697479 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640830477 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001366464 |
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| Protein GI | 153000783 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00650578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAA TGATCCGGAC AAATAGTAAT GCTCAAAATA ACGCCAATAT ATCGAATGAA
AGAGCGACTG GCTCAGATCA TCACCATAAT AACCGTGCTG AACAGCCACG TTTTTTTGAA
GAGTCTTTCC TACCACAATC TGTTCGAAGT GATTATTTAA GCGCCGCCGA AGAAACTGAA
TACGAAATTT CAGTGAACAC TCGCCGTGTT TATAATACGA GCTTTAGTGT ATTTAGCCGT
TATTGTGCCG AGCACCAACT TCAGGCCCTG CCCGCAGATC CACGAAGTGT CATTTCATTT
ATTGGTCATC AAAAAGAATT GATCCAAGAA AGCACTGGCG TTCAACTTTC TAAGCAAACA
TTAACCACAA GGTTGGCAGC AATTCGCTAC CATCATATTC AAGCGGGATT TCACTCGCCC
ACCGAACATC CACTGGTGAT CAGAGTGATG CGTGGCTTGA GCAGAAATCA ATCTCGCCAT
GTGAGTGACT ATGATCAACA ACCCATTATG TATGATGAAG TGGAAATGTT GATCCAGGCA
ATCGATGAGC AAGTACAGCC ATTAACCCGA GCTCGGGACA AAGCGATTAT TCAATTAGGA
TTACAAGGTG GGTTTCGTCG TTCTGAACTG GCAGATATAA AAGTTCAGTA TGTCAGTTTT
CTGCGTAACA AATTAAAAGT GCGCCTGCCA TATTCGAAGA GTAATCAGCA AGGCCAACGG
GAATGGAAAG ACCTGCCAGA CCATGAACCC TTTGCAGCAC TCGACGTCGT GAAAAATTGG
TTATCGTTAG CCAATATTGA AGACGGACAT TTATTTAGAT CACTTTCCCG TGATGGAAAA
AATTTACGTC CGTATCAAAT GAAAGACCGA CATTGCGGAT CTAGTTCATT ACTGAATAAA
AATAGTGGTT TCCTTACCGG CGATGATATT TATCGCATCA TTAAAAAATA TTGTACTAAA
GCAGGACTGC CCGCCAAATT TTATGGCGCT CACAGTTTGC GCAGTGGTTG CGTAACACAA
CTGCATGAAA ATAATAAAGA TCACTTGTAC ATCATGGCCA GAACCGGACA TACCGATCCG
CGCTCACTTC GTCACTATTT AAAACCAAAA GACTGA
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| Protein sequence | MSKMIRTNSN AQNNANISNE RATGSDHHHN NRAEQPRFFE ESFLPQSVRS DYLSAAEETE
YEISVNTRRV YNTSFSVFSR YCAEHQLQAL PADPRSVISF IGHQKELIQE STGVQLSKQT
LTTRLAAIRY HHIQAGFHSP TEHPLVIRVM RGLSRNQSRH VSDYDQQPIM YDEVEMLIQA
IDEQVQPLTR ARDKAIIQLG LQGGFRRSEL ADIKVQYVSF LRNKLKVRLP YSKSNQQGQR
EWKDLPDHEP FAALDVVKNW LSLANIEDGH LFRSLSRDGK NLRPYQMKDR HCGSSSLLNK
NSGFLTGDDI YRIIKKYCTK AGLPAKFYGA HSLRSGCVTQ LHENNKDHLY IMARTGHTDP
RSLRHYLKPK D
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