Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2257 |
Symbol | |
ID | 5372441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2689548 |
End bp | 2690813 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830471 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_001366458 |
Protein GI | 153000777 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000863396 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA CTACAGCCGA GCAAGCGACA GGGCATCAAA CTTCAGCCCA CCGCCAAGGG CACTCACTTG CCCATTGGCA ACACTCACAT GAGTTTTCGA ATCAGAACCG CGATGGCGAA AAAAACACAC GCTATGTACT GTATTTAACT GTGATCACTA TGGTGGCAGA AATTGCTGCC GGAACCATTT ACGGTTCTAT GGCATTGCTC GCCGACGGTT GGCACATGGG CACCCATGCA GCGGCCTTTA TGATTACCCT GTTTGCCTAT TCCTATGCCC GTAAACACGC TAACGATCCT GCTTTTGCCT TTGGCACAGG TAAGGTGAGT GTGCTTGGCG GTTACACCAG TGCAATAGCC TTAGGTTTAG TGGCATTGGT GATGTTGATT GAATCGGGAA TGCGGCTGAT CAGTCCTGAG CAAATTCATT TCAACGAAGC TATTTTTGTG GCCGTTATTG GTTTAAGCGT CAATATACTG AGTGTGTTTT TACTTAAAGA TCATCATACC CACGATCACG GGCATCACCA CGGTCATGGA CATGATCATA GTCACGACCA TGAACATGAT CATGAAGACG AATATGCTCA CGCGCATCAT AACAGCCAAG CACACACCCA TGATGATCAT GCCCATACGA CTCATTCACA TGATGCGGAT CCGCACCCGC ACCATGACTC ACATGCACAC GATGAAAGTC ATCATGATCA TAGCCATTGC CAACATGAAC AGGATCACCA ACATGCTACA GAGCATGAGC ATGAGCATGA GCATGAGCAT GAGCATGAGC ACAAGAGCCA GAAGGCCCAC GGTAGCCATG ATCACAACCT ACGCGCGGCC TATTTTCACG TACTAGCCGA TGCGTTAACG TCAGTGCTGG CCATCGCTGC CTTGTTGTTT GGTAAATACA TGGGACTAAC TTGGCTCGAC CCGATTATGG GGATTGTCGG CGCTGTGATT ATCAGCCGTT GGTCTTGGGG ACTCATTCAG CAAACCAGTC CTATTTTACT GGACGGTGGC GTTAAAGCGT CATTGCAACG TAAAGTCACA CAAACCATTG AAGCTGTAAC AGATCATCAA GTGGCCGATT TACATCTTTG GCGAGTGAGC GCCGATCACC ATGCTATTAT GGTGTCCATC GTGTCCCATT CACCAAAAGA TGTCAGTTAT TTTAATCAGT TACTGTCACA ATTTCCTGAA TTGGCCCATA TCACCATTGA ACTCCATACT TGCCGTCAGC GCGAGTGTAT GGCTAAGGAA GCCTAA
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Protein sequence | MKSTTAEQAT GHQTSAHRQG HSLAHWQHSH EFSNQNRDGE KNTRYVLYLT VITMVAEIAA GTIYGSMALL ADGWHMGTHA AAFMITLFAY SYARKHANDP AFAFGTGKVS VLGGYTSAIA LGLVALVMLI ESGMRLISPE QIHFNEAIFV AVIGLSVNIL SVFLLKDHHT HDHGHHHGHG HDHSHDHEHD HEDEYAHAHH NSQAHTHDDH AHTTHSHDAD PHPHHDSHAH DESHHDHSHC QHEQDHQHAT EHEHEHEHEH EHEHKSQKAH GSHDHNLRAA YFHVLADALT SVLAIAALLF GKYMGLTWLD PIMGIVGAVI ISRWSWGLIQ QTSPILLDGG VKASLQRKVT QTIEAVTDHQ VADLHLWRVS ADHHAIMVSI VSHSPKDVSY FNQLLSQFPE LAHITIELHT CRQRECMAKE A
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