| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2253 |
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| Symbol | |
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| ID | 5372515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2683570 |
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| End bp | 2684598 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640830467 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001366454 |
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| Protein GI | 153000773 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0242555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTA CTGCAGAAAA TAAAGAGCTT GATTCTGCCG CGCAAATTTT GCGTTTGGCC
GTACCGCAAA TGTCTGCCCT CGATATCCCC GTTACACCTG AAAACTACAC TGTTTGGTAT
GAATATTTTG CAGGGACAAA TCTCGATTTA AACCGTGCGA TTGATGGCTT TCTGGCAAAT
TCGGTCTCTT TTACTAAGGA GGTCAATACC AGCCTGTATA AGAACTTTAT TCAAGAACAG
TCACCCGAAG TGATTGAAAA TGTGCAGATT GAAACGCAAA TCCTGATCAA TAGTTTGTTA
AGTAAAATCA GCCAGTTGAG TCAAGGCACC GCGGCGTTTT CAGGTTCATT AGCCGAGTTT
GGTTTACGTC TACAGACGAA TCCCGACATT AATACCTTAA ACGAGCTGGT TGATGGTGTA
GTCGATGAAA TGCAGATGCT GCTCATCAAC AACCGTGAGA TGGAGCAAAG CCTGTGCACC
ATGGGCCAAG AAGTGCAAAA TCTTAAATCG GAAATGGAAA ACCTGAGCCT AGCAGCGATG
ACTGACCAAT TAACCTCGCT GCACAATCGC CGTGCCTATG AACTGAGTAT TCAAGATCAA
ATCTACCTCC CCCAAGATCA CCAAACCCGT TGCAGCCTTT TGCTGATCGA TATCGATAAT
TTTAAAGCCT TTAACGACAC CTATGGTCAT TTAACCGGCG ATAAAGTGTT GGCCTATGTC
GCATTAGCCT TAAAACAATG TGTGCGAGGG GATGACTTTG TGGCGCGCTA TGGTGGCGAA
GAATTTGTGG TGGTGTTACC TAATACTCAT TTTCACGATG CATTACAAGT GGCTGAAAAT
CTTCGGGAAC GTATCTCTGA GCGCCGCTTA ACCATAGGAA AAGACAAAAA GCTTTCCCTT
GGCGCGATTA CTGTTTCTAT TGGTCTTGCT TCATTGCAGC AAGGCGACGA TGCAGAAACC
CTCTTCAGTC GCGCCGACAA AGCGCTGTAT CAAGCGAAGG CCGAAGGCCG TAACTGCGTG
AGAGGATAA
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| Protein sequence | MSSTAENKEL DSAAQILRLA VPQMSALDIP VTPENYTVWY EYFAGTNLDL NRAIDGFLAN
SVSFTKEVNT SLYKNFIQEQ SPEVIENVQI ETQILINSLL SKISQLSQGT AAFSGSLAEF
GLRLQTNPDI NTLNELVDGV VDEMQMLLIN NREMEQSLCT MGQEVQNLKS EMENLSLAAM
TDQLTSLHNR RAYELSIQDQ IYLPQDHQTR CSLLLIDIDN FKAFNDTYGH LTGDKVLAYV
ALALKQCVRG DDFVARYGGE EFVVVLPNTH FHDALQVAEN LRERISERRL TIGKDKKLSL
GAITVSIGLA SLQQGDDAET LFSRADKALY QAKAEGRNCV RG
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