| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2249 |
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| Symbol | |
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| ID | 5371168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2677145 |
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| End bp | 2678878 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640830463 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001366450 |
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| Protein GI | 153000769 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.299733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATCAC TTACTCAGCC TGAACATTTT ATATTAGTTG TCGATGATGA TGCTATTGCG
AGTCAGAGGA TCAGTGATTT TATTCATAGT AAAGGTAACA ACGTGATTGT TTGTAATGAT
CTCGAGGAGG TATTTTTTGA AATAACGCAA AATACGGTTG ATTTAATCCT GATTAACTAC
TGGCTCAAAG ATGGCACTGC ACTAGCGTTA CTGAATAAGT TGAACGAGGA AAAACAAGAA
ACGCCTGTTA TTGTGATGAG TGAGACTAAA GAAAGCCAAA ACGTGTTAGC GTGTTTTAGT
ATGGGGGTAT TAGATTTTGT CGTTAAACCG ATCAACGTTG AAATATTTTG GTACAAAGTT
GAATGCTTAC TTAGTCGTGT GCAACTACAA CATAAAGTCG AACAACAAAG AATTGAACTC
GAAAAAATGC TTTATGAGAA GGCCAGAGAA GAACACATGG CCCGGCATTT GTTTGAGCAC
TTAGTTAATA TCGATAATAC TGATTTTGAT TTTGTGCAGA CCTACTGCCA AGCGAGTGCC
AATTTTAGCG GTGACATTAT CCTTAATGGC ATGGCACCTA ATGGCAATTT CTTCTTAATT
CTCGCCGATT CAACGGGTCA TGGCCTGAGT GCAGCCATGC CGATTATGCG CGTCGCGAGC
ACATTTAGAG CTATGGTTTT AAAGGGGTTT TCTTTGATAA CGCTGATCTA CGAGCTGAAT
GCTAAGGTTC ATCGCGAGAA TCCAGAAGAC AGATTCGTAG CCTGTATTAT TTTGGAAGCC
GATTTTAATC GCAATAAATT ACACATTTGG AATGGCGGTA TGCCGCCTGT GTATATTCAG
GCTGATGAAC ACGCCAAGTT ACCGAATACT GATATTGAAG AACGACATAT TTTAAGTTCA
GATAGCCATA AAGCGATAGA ACAATTTAAA TCGACCAATA TGGCACTGGG TATATTGCCG
CCACATACTT TTATTGCTGA TATTTTTACC GTTGATTTAC CGATTAATGG CCATGCCTGT
CTTTTTAGTG ACGGTTTAAT TGAGCAATAT ACCCATGAAG AACGCCCATT TGGTATTGAT
AAATTAAAAG CGTTGTTTAT TAATTTATCC GGTGGTCTTA CCCATTATTT GAATGAAAAT
ATGCATGAGT ACTGCTCTGC TGAAAATATT GCAGATGATA TTACGATTTG CACTTTAGAT
TTCGAGAAAC TAAGCCGTTG GCATCAAAGT CGAGAAGTCA GCCGAGTGCA ATCTATTATG
GACGGTGAGT TTTGTTGGGA TGTCAGCATC GCCGGACCTA TGTTACTCAG CGCTGACTAT
TTAAGCTCAT TAAATCAATT TTTAAGCATA TTTGGCTTTG CCACTCATTT CTGCCAACGG
GTTTTTACTG TCGTCGCAGA GTTATTTAGC AACGCCATTG ACCATGGTGT ACTAAAATTA
GATTCACGGC TAAAAAACGA TCCAGAAGGC TTCGAACTGT ACCATAGTAT TAGGGACAGT
TTTGCTGACA GACTTACATC AAACGATTGG GTGAAAGTGA GCATTATCTG GCGCTCATCG
AAAAACGAGT TACATATTAG TGTGAGCGAC AGTGGAAAAG GTTTTACGGG TAATGAGAAC
ATCATTGCTG ACATTCCTCA GTTGTCTGGT CGCGGTCTCT CACTGGTGAA AACATTATCT
AAGACCTACG AATTAGTACC CCCAGGGAAT ATAACTAAAG TCATAATGGA ATAG
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| Protein sequence | MVSLTQPEHF ILVVDDDAIA SQRISDFIHS KGNNVIVCND LEEVFFEITQ NTVDLILINY
WLKDGTALAL LNKLNEEKQE TPVIVMSETK ESQNVLACFS MGVLDFVVKP INVEIFWYKV
ECLLSRVQLQ HKVEQQRIEL EKMLYEKARE EHMARHLFEH LVNIDNTDFD FVQTYCQASA
NFSGDIILNG MAPNGNFFLI LADSTGHGLS AAMPIMRVAS TFRAMVLKGF SLITLIYELN
AKVHRENPED RFVACIILEA DFNRNKLHIW NGGMPPVYIQ ADEHAKLPNT DIEERHILSS
DSHKAIEQFK STNMALGILP PHTFIADIFT VDLPINGHAC LFSDGLIEQY THEERPFGID
KLKALFINLS GGLTHYLNEN MHEYCSAENI ADDITICTLD FEKLSRWHQS REVSRVQSIM
DGEFCWDVSI AGPMLLSADY LSSLNQFLSI FGFATHFCQR VFTVVAELFS NAIDHGVLKL
DSRLKNDPEG FELYHSIRDS FADRLTSNDW VKVSIIWRSS KNELHISVSD SGKGFTGNEN
IIADIPQLSG RGLSLVKTLS KTYELVPPGN ITKVIME
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