| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2241 |
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| Symbol | |
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| ID | 5373429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2667802 |
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| End bp | 2669442 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640830455 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001366442 |
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| Protein GI | 153000761 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.195601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTG AAGATTCGTT AGAGCAACTT AAACGACAGT TTTTACATGC ACTGCCGGAT
AAAAAGAAAC AAATCATTAC CCTGTGGATT TCATTGCGTA AAAATTGGAA TGCACACATG
TTGTCGGCTG TGTATCGTGA GGTGCATAAC TTAAAAGGAT CGAGCGAGAC CTTTGGATTG
TCGGATACCA AACACATAGT CGATAAACTT GAGCTGCAGC TTAAAGGGTT GCTCAATGCG
CCAGCTCCCG AACTACCAAC GATCAAGGGT TTAGATACCC TCTTCCACCA GTTGTTGCAA
AACAATATGC GCGGTCAACC GTCGCCGCCT GTGGTAGAGG CGCAAATGCA GCAAAGCCCC
TATAAACCTG CTAAGGCGCG GCATGATCAT CATATTGCCA TCATAGAAGA CGATGGTAAT
GTTGGCGCGA TGATCACAAA GCAACTGCGA GAGTTCGGTT TTAGTGTGCA GCATTTTTTG
AATTTCACGA GCTTTCTGGT GGTGCAAAAT GAAACGCCCT TCGATCTTAT TCTATTGGAT
TTAATTCTCC CCGATTGGAC TGAAGAGGCC TTGTTCGAAG CCGCCACTGA GTTTGAAAAG
AACAATACCC GAGTGTTTGT TTTATCCTCG CGCGGGGATT TTGACATGCG GTTGCTGGCC
ATTCGTGCCA ACGTTAGCGA ATATTTTGTC AAACCTGCGG AAACCACTTT ATTGGTGCGC
AAAATCCATC AATCTCTCAA GATGTCAGAG AAGCAGCCCT TGAAGGTGTT ACTGGTGGAT
GATCAACAGT CTATGGTGGA TTATTTTTCA AGCCTGTTAC GCAGTCACGG TTTGATGGTG
AAAGGGTTAT CGAGCGCCGA GCAAGTTTTG CCTGCCCTTG AGCAGTTTGA GCCTGATTTG
TTCATCTTTG ATTTATACAT GCCTGAGGTG AACGGGCTTG AACTGGCAAA GATGATACGC
CAACTGGATA AATACACCTC TAGCCCAATT CTCGTGTTGA GCTCTGACGA TACGATGCAG
AATAAAGTCA GCATCATACA AGCGGGATCA GATGACTTAA TTTCAAAGCA AACTGCGCCG
AGCTTATTTG TCGCGCAAGT GATATCCCGC GCCCAACGTG GCCATGATAT TCGCAGTTCG
GCAAGCCGCG ACAGCTTAAC GGGATTGTTA AACCATACCC AGATTCTGGT TGCCGCGAGG
CGCTGCTATA ACGTGGCAAG GCGAATTAAC TCTCAGGTTT GTATCGCCAT GTTCGATTTA
GATCACTTCA AAAAAGTGAA CGATACCTAT GGCCATGCCG GTGGGGATAA GGTGTTGCTA
GCCTTTGCCC ATCTTTTACA ACAATCCTTA CGGCAAACTG ACTTTACCGG TCGCTATGGC
GGTGAGGAAT TTATGTTAGT GCTGCCAGAT ATGCAAAAAC CACTGGCGAT CGCTAAGTTA
AATGCGATCC GCGAGAGCTT TAGCCATATC GTCTTTGTCG AAGATGGCAT CGAGTTTAAG
GTGACGCTCA GCGGCGGTTT AGTGTTCTCG GACGAATGTG AGGAGTTTCA AGATTGTCTG
TTACTGGCGG ATAAGCACTT ATACGAGGCG AAACGTTTAG GCCGAAATCA ATTAGTGTTT
TCACCAAGTG AGCAGGATTG A
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| Protein sequence | MSFEDSLEQL KRQFLHALPD KKKQIITLWI SLRKNWNAHM LSAVYREVHN LKGSSETFGL
SDTKHIVDKL ELQLKGLLNA PAPELPTIKG LDTLFHQLLQ NNMRGQPSPP VVEAQMQQSP
YKPAKARHDH HIAIIEDDGN VGAMITKQLR EFGFSVQHFL NFTSFLVVQN ETPFDLILLD
LILPDWTEEA LFEAATEFEK NNTRVFVLSS RGDFDMRLLA IRANVSEYFV KPAETTLLVR
KIHQSLKMSE KQPLKVLLVD DQQSMVDYFS SLLRSHGLMV KGLSSAEQVL PALEQFEPDL
FIFDLYMPEV NGLELAKMIR QLDKYTSSPI LVLSSDDTMQ NKVSIIQAGS DDLISKQTAP
SLFVAQVISR AQRGHDIRSS ASRDSLTGLL NHTQILVAAR RCYNVARRIN SQVCIAMFDL
DHFKKVNDTY GHAGGDKVLL AFAHLLQQSL RQTDFTGRYG GEEFMLVLPD MQKPLAIAKL
NAIRESFSHI VFVEDGIEFK VTLSGGLVFS DECEEFQDCL LLADKHLYEA KRLGRNQLVF
SPSEQD
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