| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2226 |
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| Symbol | |
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| ID | 5373359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2649788 |
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| End bp | 2651167 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640830439 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001366428 |
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| Protein GI | 153000747 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00326481 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATT CAGGCTATCA AGCCAAACGT TTAATCCAAT TGGCGCTGCC GGTGCTAATA
GCTCAGGTCA CTCAGACCAT GATGGGCTTT ATTGATACCG TTATGGCGGG CCGTGTTAGC
GCGGTTGATA TGGCCGCTGT GGCGGTCGGC ACTAGCCTTT GGTTACCCGC TATTCTGTTT
GTCCAAGGTT TGCTGATGGC TTTTACGCCT TTATTTGCCC ACTACAATGG AGCGAATAAT
CAAAAAGCCA TCCAACCTTT GGCCTTTCAA GGTGCCTATC TTGCCATCAT TGGTGGCATT
GGCGTGATGA TTTTCCTCGC ATCAGCGCCC TTTGTGCTTG GCCATATGGA TTTAGAACCC
GAATTATACC GCTTAACCAT TGGATATCTC GACGGTATTT TATGGGGTGC GCCCGCATTT
GTGCTATATC AAGTGCTGCG CGGCTGTAGT GAAGGGATTT CTTACACGTT ACCAACTATG
GTCATTGGCT TTGTCGGCTT AGCAGTGAAC ATTCCCGCCA ACTACATCTT TATTTACGGA
CACTTTGGCG TACCTCCGAT GGGCGGGGCT GGCTGTGGTA TTGCCACCGC TTTAGTTTTT
TGGGCCATGC TGATTGCTAT GACTATTTAT ATGCAACTGC ATAAGAAATT CGCGGCCTTG
GCTCCTTTCA GTAAATTTCA TCGTCCTGAC TTTGAAACGA TGAAAAAAAT GACCAAACTC
GGTATGCCGA TAGCAATGGC GTTGTTTTTT GAAGTGAGTT TATTTGCCAT TATTGCGTTG
TTACTCGCAC CATTAGGTGC AACTGTGGTG GCAAGTCACC AGATAGCACT GAACTTTTCT
GCGATTGTAT TTATGCTGCC GTTGTCTATT GGTATCGCAG TATCGATTCG AATTGGCTAT
TACTTGGGTC GCGATCGTGC TGATATTTCT GCAGTGGTCG CCAAAGTGGG TTTATGGTTA
GCGCTATCCC TTGCATTATC AACTGCAGTC TTGACCGTCA TATTTAGATT CCAAATTGCA
GAGCTTTATA ATGGTGATCC TGAAGTGGTC GCTTTAGCCG GCAGCTTGAT GTTAATGGCG
GCACTGTATC AATTATCGGA TTCAGTCCAA GTGGTTGCCG CCGGAGCCCT ACGTGGTTAT
AAAGATACCC GCAGTGCCTT TTATATCACG CTGTTTTCCT ATTGGGGCAT AGGTATGTCA
CTCGGCTATA CCTTGGCTTA TACGGATCAT ATCGTTCCTG CCATGGGCGC ACACGGTTTT
TGGACCGGAT TGATTGCAGG TCTCACCTCG GCGGCGCTGC TATTTTTCAT TCGACTGCGT
TACATCCAAA AACATGGTGT GCATTTAAGC CTGATTGAAG GCGACAGTGT GCATCACTAA
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| Protein sequence | MNNSGYQAKR LIQLALPVLI AQVTQTMMGF IDTVMAGRVS AVDMAAVAVG TSLWLPAILF
VQGLLMAFTP LFAHYNGANN QKAIQPLAFQ GAYLAIIGGI GVMIFLASAP FVLGHMDLEP
ELYRLTIGYL DGILWGAPAF VLYQVLRGCS EGISYTLPTM VIGFVGLAVN IPANYIFIYG
HFGVPPMGGA GCGIATALVF WAMLIAMTIY MQLHKKFAAL APFSKFHRPD FETMKKMTKL
GMPIAMALFF EVSLFAIIAL LLAPLGATVV ASHQIALNFS AIVFMLPLSI GIAVSIRIGY
YLGRDRADIS AVVAKVGLWL ALSLALSTAV LTVIFRFQIA ELYNGDPEVV ALAGSLMLMA
ALYQLSDSVQ VVAAGALRGY KDTRSAFYIT LFSYWGIGMS LGYTLAYTDH IVPAMGAHGF
WTGLIAGLTS AALLFFIRLR YIQKHGVHLS LIEGDSVHH
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