Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2225 |
Symbol | |
ID | 5373358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2649131 |
End bp | 2649754 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640830438 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_001366427 |
Protein GI | 153000746 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00109556 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACAG GTATAGTTCA AGCCACCTGC GAGGTGGTTG CAATACATAA GAAAGATGGC CTAAATACCC TTGAGGTAGC GTTCGAACCT GATTTGCATG AGGGACTTGC GATTGGTGCA AGTGTGGCAA ATAACGGGGT ATGTCTTACT GTGACTCAGG TCGTTGATGA TAGGGTATTT TTCGACGTAG TGGAAGAGAC CTTGCGACTG ACGAATCTGG CTAATTTGTC TATAGGTCAA AGCGTTAATG TTGAGCGTTC GTTAACTTTT GGTAGTGAGA TTGGTGGTCA CATTCTCTCT GGCCATATCC ATACTAAGGC TAAAGTCGTT GATATTAGCC ATACAGAACA GCATTATGAT CTGACACTGG GCATTGAGCC TAAATGGATG GATTACATTT TTTATAAAGG TTTTGTTGGC GTTAACGGCT GCAGCTTAAC GGTAGGCGAG GTGTGTGACT CCGGCTTTAA GTTGCACTTA ATTCCTGAAA CCCTAAAGCT GACCAATTTA AGTCAGTATA AAGTGGGTGA TGAACTTAAT ATTGAGATCG ACAGCCAAAC GCAAGTTATC GTCGACACAG TCGAGCGCGT GCTGGCCAGG CGTTTTAACG AACAAGCCCG TTAG
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Protein sequence | MFTGIVQATC EVVAIHKKDG LNTLEVAFEP DLHEGLAIGA SVANNGVCLT VTQVVDDRVF FDVVEETLRL TNLANLSIGQ SVNVERSLTF GSEIGGHILS GHIHTKAKVV DISHTEQHYD LTLGIEPKWM DYIFYKGFVG VNGCSLTVGE VCDSGFKLHL IPETLKLTNL SQYKVGDELN IEIDSQTQVI VDTVERVLAR RFNEQAR
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