| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2195 |
|---|
| Symbol | |
|---|
| ID | 5370975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2615773 |
|---|
| End bp | 2617581 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640830408 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366398 |
|---|
| Protein GI | 153000717 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.237664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATA ACAATGAATT AGTATTAAAA CCTATCAGCG CTCTTTTAAA TGAGTCTTTT
TATATTCCAG CATATCAACG AGGCTATAGA TGGACAGAAC GACAAGTAAC TGAGTTACTT
AATGATATAA AAGAGTTTCA GCAACAGGCT GAAGAAGGCC CAAGAGACGC ATTCTACTGC
TTACAGCCTA TTGTAGTAAA AAAGTATAAT GATTCTTGGG AGCTCGTAGA TGGCCAGCAA
CGATTAACTA CGATTTTTAT CATACTTACC TGTCTGAAAG AGGTAGCCGC TCTTTTTGGG
CTTGGTAGAT ACAAGTTAAG TTATGAAACA AGAGATAATA GCGCGGCTTT CTTAGAAGAT
ATTAAGACTG AACTAAGTAA TGAAAATATA GATTTTTTTC ACATAAGTCA GGCTAAGCAA
GCCATAGAAC AATGGCTTGC AAAACAAGAT CCTACTTACA AGGTTAAATT TTTACAGACC
TTACTGAATA GTGATGAGAT GGGCAAGAAT GTAAAAATAA TTTGGTATGA GATTGGTCAG
TCTGAAAATG CAACGGCAGT ATTTACCCGT CTTAATATTG GTAAAATCCC TTTAGTTAAT
GCCGAGTTAG TTAAAGCATT GTTCTTAAAA TCAAGTAATT TTAGTAAGAG CCATGATGCA
AAGCATCTGC AGCAGTTGAG TATTGCGCAA GAGTGGGACA CAATCGAAAA ACGCTTACAA
GATGATGCTT TTTGGTACTT TATTAGCAAC AAGTCATATA AAACAAACAG AATTGAGCTT
GTCCTTAATC TTGCAGCAAA AGATCTTTGT ACTGAGGGCA TTCAACAAAA TGACCCTTTA
AAAACATTCC TTCAATTTAA TCAGTTGTTT ACGGGCCAAA ATAAAGGTAT TACTACTGAG
TGGCTTAAAA TAAAACAATG TTATATGACT TTAGAAGAAT GGTATAACGA CAGAGCGTTA
TTTCATCTTA TTGGTTATTT AATAACACAA AACATGTCGA TTAATGAATT GTTTTTATTA
CATAAACAAT CCAGTAGTAA GTTAGCCTTC AAAAAGGCAC TCATACTTAA GATATTTAAT
CCATTATTCC CGTCATTCTC TTTAGATGAC TTATCTTTAG AATCTGTGAC TGAAACTTTA
ATACAGCTAA GTTATGGCCG AGATCGTCAA AAAATACAGA AAATCCTTTT ATTGTTTAAT
GTTGCAAGCT TATTGGCGAA CTCAAAAACA AACTCACGAT TTCAATTTGA TCGATTCAAG
GCTGAAGATT GGGACATTGA GCACATACGC TCTGTAGCCT CTGATATGCC AAATAGTAAG
GATAAACAAA AAGTTTGGTT AAAAAATGTC GTTGAATATA TTTCTGACGA AAACACTTTC
GAGCCAAATG AGCGCTCAGT TAGTTATATT GAAGAAGCTC AACAAATCAA AAGAGCTGCA
ATTGAACTAT TAGAGTGCAA ACTATTTGAC TCAGTGCAAT TTGAAATAAT CTTCCAAAAA
GTTATAGAAC TATATGATCC TCATAGCAAT GAAGAAGTTG ATGATTCAAT CGGCAACCTT
ACATTGTTAG ATAGCTATAC AAACCGTAGC TATCAAAATG CCGTTTTTCC TATAAAGCGA
TTTAGAATAA TAGCCCTTGA CAAGCGAGCG ACATTTGTCC CTTTATGTAC CAAAAATGTT
TTTTTAAAAT ATTACAGTAA GCAAGTCGAT AAAATGCTTT TTTGGGGGGC AAAAGATAGT
CAAGATCATC AACAAGCGAT CTCAGAAATG ATATATAGTT TTCTAGGTGG TAAAGGAGTG
TACCTATGA
|
|---|
| Protein sequence | MSNNNELVLK PISALLNESF YIPAYQRGYR WTERQVTELL NDIKEFQQQA EEGPRDAFYC
LQPIVVKKYN DSWELVDGQQ RLTTIFIILT CLKEVAALFG LGRYKLSYET RDNSAAFLED
IKTELSNENI DFFHISQAKQ AIEQWLAKQD PTYKVKFLQT LLNSDEMGKN VKIIWYEIGQ
SENATAVFTR LNIGKIPLVN AELVKALFLK SSNFSKSHDA KHLQQLSIAQ EWDTIEKRLQ
DDAFWYFISN KSYKTNRIEL VLNLAAKDLC TEGIQQNDPL KTFLQFNQLF TGQNKGITTE
WLKIKQCYMT LEEWYNDRAL FHLIGYLITQ NMSINELFLL HKQSSSKLAF KKALILKIFN
PLFPSFSLDD LSLESVTETL IQLSYGRDRQ KIQKILLLFN VASLLANSKT NSRFQFDRFK
AEDWDIEHIR SVASDMPNSK DKQKVWLKNV VEYISDENTF EPNERSVSYI EEAQQIKRAA
IELLECKLFD SVQFEIIFQK VIELYDPHSN EEVDDSIGNL TLLDSYTNRS YQNAVFPIKR
FRIIALDKRA TFVPLCTKNV FLKYYSKQVD KMLFWGAKDS QDHQQAISEM IYSFLGGKGV
YL
|
|---|
| |