Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2175 |
Symbol | |
ID | 5372602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2592397 |
End bp | 2593647 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640830390 |
Product | hypothetical protein |
Protein accession | YP_001366380 |
Protein GI | 153000699 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.559227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGTCGT CAGCTGAGCA AAATAACATT ATTAAGCTTC AAATTACACC GGCTCTAAAT GCTAAATTTG GCATACCAAT AAGCCAAGGT GATGTGTTTT CTACGATTAT CAATCCGATG TTTAACCGCA ACATTCAACT CAACCCTAAA GTGTGTATTC AGTGCTTGAA TGAAGATGGC TACCTGTTAA CGGAAGTGCA GAATCCGTTT TGTCATGCCT GTTCCAAACA CCAATCTGCA CTGACGAGTC AATGCACCAC GTGTTACGAA AACCTTGCTT GGGATATTCC ACTTATAAAA GGGCACTGTA CTTCTCCTCG ATGCGGGGTA CAACTGAAAC CCTTGTCAGA AAATGTGCGT TCATTGAGTG AGGCTCAAGT GTCAGATTGC CTCTATGCCG CACTGGTATT GGAAAAAGAG CACATCATGG CGCTCAAACC GAACGCCTAT GCTTCACTGC CATTTTATGA AAACATGCTC GAAAAGGGAT ACCAGTTATT AACGGATAAT GCATTTTTTC GAGAGTGGGT ACAAAAGACA CTTCAGGCAA CCTCATCTTT ACTACCTCAC AATATCCGCA GTGTGGCTAT TGTGCAGTTC CTTGAAACAC TTTCCTGCAC GTGGCCTGCC GCTACGTTAG ATATTGTTAT CCCAGCTACC CCCGCAGATG GCATTGCTCT TCCGGTGACA GAACAATGGC TTCCATTTGG AAAAGCGTCT CGGCTACTTG AGCTGAGGCC AGAAGAATTG CAGCTGCTTC AACACGTTAA TTTAGTGAAA CATGCACGTA AAAGCAGACT TCACCATAAT AGCCAAATTG ATGTCGCACC TATTTTCCAG TTGTTAGTCG GTAACGACAT CCAACCTGGC ATGGTGTGCT TATCAACACT CACGGAGGTC ATGGTGCATA ATGATGTTGA AATGTATGAC ATTCTCATAG GATTCAAAGA AGGCCGCCTG CAGTTAGGAT ATGGCGAAGG TCACAATTTA CGACGTGCTA TCTGGTGCGA ACCGGCGTCT TTTATACGGT TTGCAAAGGA CGTCTTTAGC AAGCGGCAAT ATGACGCTAT CTCCCTAGAG AAAGCGGTAT CATTAACAGG CTTACCCATG GAGCTACTTC ACGCACTTAG AAAAATGGGT AAACTTCGCC CTCCTCGCGT CGCGCGTGCC GGCAGTCTGG CACTTTGCCA ATTTGAAGAT GTACTACAAA TACGCCAGCA ACAAAAACCG ATGCAGTTAT CACTCATATA A
|
Protein sequence | MVSSAEQNNI IKLQITPALN AKFGIPISQG DVFSTIINPM FNRNIQLNPK VCIQCLNEDG YLLTEVQNPF CHACSKHQSA LTSQCTTCYE NLAWDIPLIK GHCTSPRCGV QLKPLSENVR SLSEAQVSDC LYAALVLEKE HIMALKPNAY ASLPFYENML EKGYQLLTDN AFFREWVQKT LQATSSLLPH NIRSVAIVQF LETLSCTWPA ATLDIVIPAT PADGIALPVT EQWLPFGKAS RLLELRPEEL QLLQHVNLVK HARKSRLHHN SQIDVAPIFQ LLVGNDIQPG MVCLSTLTEV MVHNDVEMYD ILIGFKEGRL QLGYGEGHNL RRAIWCEPAS FIRFAKDVFS KRQYDAISLE KAVSLTGLPM ELLHALRKMG KLRPPRVARA GSLALCQFED VLQIRQQQKP MQLSLI
|
| |