Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2170 |
Symbol | |
ID | 5373421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2585980 |
End bp | 2587416 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640830385 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_001366375 |
Protein GI | 153000694 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00937158 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACC ATTCCCAGCC AACAGGCGCT GATTACAATT ACGCCATTGT CCGCCAATTT GCCTTAACCA CAGTTTTGTG GGGTATTGTT GGTATGTCAG TCGGCGTATT AATTGCGGCT CAGTTAATCT GGCCTCAGCT GAACTTTGAC ACTCCTTGGT TAACGTATAG TCGCTTGCGA CCATTACACA CCAATGCGGT GATCTTCGCG TTCGGTACAT CAGCCCTTTT TGCAACATCC TATTATGTCG TACAACGCAC CTGTCAAACC CGACTATTTG CACCTAAGTT AGCCGCATTT ACGTTTTGGG GATGGCAAGC CATCATTCTG TCAGCAGCTA TCACTTTACC AATGGGTTTC ACTCAAGGTA AAGAATACGC TGAATTAGAA TGGCCTATCG ATATCGCAAT TACTATCGTT TGGGTGTCCT ACGCTATTGT GTTCTTCGGT ACTATTATCA AACGAACGAC TTCGCATATT TATGTGGCGA ACTGGTTCTT TGGTGCCTTT ATTATTACCG TTGCTGTACT ACACATAGTT AACTCTATGG CAGTACCAGT CAGTCTGTTC AAGTCATACT CTCTTTATAG CGGCGCTGTC GATGCTATGG TGCAGTGGTG GTATGGTCAC AATGCGGTAG GTTTCTTATT AACCGCAGGC TTCTTGGGGA TGATGTATTA CTTCGTACCT AAGCAAGCGG GTCGTCCTGT GTACTCTTAC CGTCTATCTA TCGTCCATTT TTGGGCTTTG ATCGCACTGT ATATTTGGGC TGGTCCTCAC CACTTACATT ACACAGCTTT ACCTGACTGG ACTCAGTCTT TAGGTATGGT GATGTCACTG ATCCTATTCG CACCTTCTTG GGGCGGTATG ATTAACGGTA TCATGACCTT GTCTGGTGCT TGGCATAAAC TGCGTACTGA CCCTGTATTG CGTTTCTTAG TCGTTTCTCT GTCTTTCTAC GGTATGTCTA CCTTCGAAGG CCCGATGATG GCAATTAAGA CAGTTAACGC ATTATCACAT TACACAGATT GGACTATCGG TCACGTTCAT TCCGGCGCGC TAGGCTGGGT TGCAATGGTG TCTATTGGTT CTCTGTATCA CTTGATCCCT GTATTGTTCG GCCACGGCCG CATGTACAGC ATCAAGTTAG TCAACGTCCA TTTCTGGTTA GCGACTATTG GTACTGTGCT TTACATCGTA TCTATGTGGA TTTCAGGTGT AATGCAAGGT CTAATGTGGC GCGCAGTGAA TGCTGACGGT ACTTTGACTT ATAGTTTTGT TGAAAGTCTT GAAGCTTCAT ATCCTTTCTA CTTTGTACGT TTCCTTGGCG GTTGTTTCTT CCTGACCGGT ATGCTGATCA TGGCATACAA CGTGATCCGT ACTGTGAAAG CCTCTAAAGA TTCATTGCCA GCATTGGCTG AACCAACAGC GGCTTAA
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Protein sequence | MMNHSQPTGA DYNYAIVRQF ALTTVLWGIV GMSVGVLIAA QLIWPQLNFD TPWLTYSRLR PLHTNAVIFA FGTSALFATS YYVVQRTCQT RLFAPKLAAF TFWGWQAIIL SAAITLPMGF TQGKEYAELE WPIDIAITIV WVSYAIVFFG TIIKRTTSHI YVANWFFGAF IITVAVLHIV NSMAVPVSLF KSYSLYSGAV DAMVQWWYGH NAVGFLLTAG FLGMMYYFVP KQAGRPVYSY RLSIVHFWAL IALYIWAGPH HLHYTALPDW TQSLGMVMSL ILFAPSWGGM INGIMTLSGA WHKLRTDPVL RFLVVSLSFY GMSTFEGPMM AIKTVNALSH YTDWTIGHVH SGALGWVAMV SIGSLYHLIP VLFGHGRMYS IKLVNVHFWL ATIGTVLYIV SMWISGVMQG LMWRAVNADG TLTYSFVESL EASYPFYFVR FLGGCFFLTG MLIMAYNVIR TVKASKDSLP ALAEPTAA
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