| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2167 |
|---|
| Symbol | |
|---|
| ID | 5372204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2584184 |
|---|
| End bp | 2585152 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640830382 |
|---|
| Product | cytochrome c oxidase, cbb3-type, subunit III |
|---|
| Protein accession | YP_001366372 |
|---|
| Protein GI | 153000691 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0262117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCT TCTGGAGTGT TTGGATTAGC GTACTCTCGT TAATTGTGAT CGCGGGATGT
TTTCTATTAC TGCGTGTGTG TTCTAAGAAC ACCACGGACG TAAAAGAAGG CGAATCCATG
GGTCACAGTT TCGACGGTAT TGAAGAACTC AATAACCCAC TGCCAAAATG GTGGAGTTAT
ATGTTCTATA TCACTATCGT GTTTGGCTTG ATCTATCTAG CCTTATTTCC TGGTTTAGGT
AACTACAAAG GCCTTTTAGG CTGGACCAGT TCTAACCAAA GCATTGGTAC TGAGCAAGGT
ATTAAAGCCG ACTCTGCCGC AGCCATTGAG CTTGCCGCAA AAGAAGGCCG TTATGTTCAG
TATGACCAAG AAGTAAAACA CGCTGATGAA AAATATGGCC CAATCTTCGC GGCTTACTTG
GCTACACCAC TAGAAGAATT AGTGAAAAAC CAAGAGGCAT TAAAAGTGGG CGGCCGTTTG
TTCCTACAAA ACTGCGCACA GTGCCACGGC TCTGACGCAC GTGGTAGCAA AGGCTTCCCT
AATCTCACCG ATGGTGACTG GTTATATGGT GGCGACTTAG CCACGATTAA AACCACTATC
ATGGGTGGTC GTCATGGCAT GATGCCGCCA AAAGGTGGTT TGCCAATCGA TGACAGCGAA
ATTGCGGGTT TAGCTGAATA CGTTGTTAAA TTGTCTGGTC GTGAGCACGA TGAAACACTC
GCCGCTCAAG GTCAAGGCTC ATTCATGAAA GGTTGTTTCG CGTGTCATGG TATGGACGCT
AAAGGCAACA AGTTCATGGG TGCTCCGAAT TTAACTGACG ATGTTTGGTT ATATGGCGGT
AGCCGCGGCG TGATCGAAGA AACGATCAAA CACGGCCGTG CTGGTGTCAT GCCAGCCTGG
AAAGACGTTC TCGGTGAAGA GAAAGTTCAC GTGATCGCAG CTTATGTTTA TAGCTTGTCA
AACAAGTAA
|
|---|
| Protein sequence | MSSFWSVWIS VLSLIVIAGC FLLLRVCSKN TTDVKEGESM GHSFDGIEEL NNPLPKWWSY
MFYITIVFGL IYLALFPGLG NYKGLLGWTS SNQSIGTEQG IKADSAAAIE LAAKEGRYVQ
YDQEVKHADE KYGPIFAAYL ATPLEELVKN QEALKVGGRL FLQNCAQCHG SDARGSKGFP
NLTDGDWLYG GDLATIKTTI MGGRHGMMPP KGGLPIDDSE IAGLAEYVVK LSGREHDETL
AAQGQGSFMK GCFACHGMDA KGNKFMGAPN LTDDVWLYGG SRGVIEETIK HGRAGVMPAW
KDVLGEEKVH VIAAYVYSLS NK
|
|---|
| |