| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2066 |
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| Symbol | |
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| ID | 5371126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2477344 |
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| End bp | 2479248 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640830270 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001366271 |
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| Protein GI | 153000590 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000803773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATGT CAAAATCATA TCCAATTTTT TTACTGCTTA TTTTCTTAGG TCTCTTTGCT
TGGGTGTATC AAAGCGAAAA CAGCCAATTG CAAGTCCAAC AGCAGCAAGA ACTCGATAGC
TTTAAATCTA GCTTAAGCCG CTACCAACAA TGGCAGGGTA ACGGTGTAGA ACTCTTTAAA
AAACTTTCTG AAAACTACTC ATTCCAGTTC TTCCAATATA TTGATGATAC CGACGGCCAA
CTGAGCCATA CCGAAGGAAG CTTAGACAGT AAACATCCCC ACCCTTTAGC GAGTTTATTC
TCCATCGAAC TCAGCCACAC ACAAAAATTG GCATCGGGTC GTTTACAGGT CAAGCTCAGT
GCAAACCAAG CGATTAATAC TGCAATTAGT AACACTGAAA AACTCGGTGT CATGTTGCTA
GCGACTTACC TTATTTTGCT GTTAGTGTTT ATTCTATTAA TGTCGAAACT CAGGGCTGCA
GTACGTTATG CTGCTGATTA TATTTCAAAA ATACCAGAGT TAGGCTTTTC TGCCGTCGCA
GCTTCGAAAC TGACTGGCGA GCTCACCCCT ATTGGTATCT CCCTCGAAGA ATGTCGCCTG
CAACTTAAAG CCCAAATCGA TAAGCTCAAT CAAGAAAATG AAAAACTGCA TAAAGCAGCC
TATCAAGATG CCGTCACAGG CTTTGGTAGT CGCCAACGGT TTACCCAAAA ATTAGAAACC
ATTAGTCATC CCGATATCCC TCAACTTGGG CTGATGGCGA TGATTAAAGC GACCGAGCTG
ACCCTCATTA ATCAAAAACA AGGCCGTTCC GCGGGTGATG ATTATCTTTC GAGTGTGGCC
AATTGCATCC GCAAAGCTTG TAGCAAATAC GTAGATGCCG AATGTTTTAG GGTATCGAGT
GCCGATTTTG CGGTGTTTAT TCCCGATGTC ATGCTAAAAG ATGCACCGAA ATTTTTAGAC
CAATTAAAAA TTTACCTCGA TGAATATCAG CAGATGACGA GTGCAGAATC CGTCGCCCAT
ATAGGCTTAG TCCCCTATCG CCAAGGTACC GAAGCGGTAA ATTTACTGAC AATTGCCGAT
ACTGCGGTCA GCATAGCGCA GACCCTTGGC CCCAATAGCT ATCATATCCA AGAGAAACTC
AATGGAGATG AGCAGTTTGG TGACGATCGT TGGAAGATGG CAATCCATGA TTTAGTGACA
CGCCAAGCAT TGAAATTCTA CCAGCAGCCT ATTCAGCCAT GCCGTGGCGA TGTTGAGGTT
TACCGTGAGT TGTTGGCGCG CTTTTACAAT AGCGAAGGCA AATTCTTACC TACCACCACA
GTGATTGCCA TGGCTGAACG TCACGGTATG AGTTCGGAAT TGGATAAACT GGTCGTGATC
AGTGCATTAA AGATACTTAA AGAAAACCCG ACTATTACCG GTAACTTTGG TATCAATATC
AGCGCATTTT CAGCCCATCA AGACATGTTT GTCGCTTGGC TAAAAGACAT ATTAGGTAAG
CAAAAATACA TAGCATCGCG CTTAGTATTT GAGATCAACG AGTCCGGCAT GCAGTCTAAC
TTAGGGGCGA GTTATAAATT TGTCCGCGAA GTGCACAGTG TCGGTTCACG AGTGTCGATT
GAGCGTTTTG GTATGAGCTT TACCTCCTTC AAATTCTTCA GCGAAGTGCG GCCCGACTTC
ATCAAGCTCG ATGGTAGTTA CACTTCTAAT ATCGATGAAG ACAGCAACAA TAAGTTCTTC
GTGCGAATGA TGGTGGATGT CGCCCGACGA ATTGGCATCC GGGTCATCGC AACCAGTGTC
GAACGCCAAG AAGAAAAATT AACCCTCGAA AAACTCTTAG TCGATGGATT GCAGGGCTAT
TACATAGCAC AACCCCAAGC CATGGCCATT ACAGATCAGA TTTAA
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| Protein sequence | MAMSKSYPIF LLLIFLGLFA WVYQSENSQL QVQQQQELDS FKSSLSRYQQ WQGNGVELFK
KLSENYSFQF FQYIDDTDGQ LSHTEGSLDS KHPHPLASLF SIELSHTQKL ASGRLQVKLS
ANQAINTAIS NTEKLGVMLL ATYLILLLVF ILLMSKLRAA VRYAADYISK IPELGFSAVA
ASKLTGELTP IGISLEECRL QLKAQIDKLN QENEKLHKAA YQDAVTGFGS RQRFTQKLET
ISHPDIPQLG LMAMIKATEL TLINQKQGRS AGDDYLSSVA NCIRKACSKY VDAECFRVSS
ADFAVFIPDV MLKDAPKFLD QLKIYLDEYQ QMTSAESVAH IGLVPYRQGT EAVNLLTIAD
TAVSIAQTLG PNSYHIQEKL NGDEQFGDDR WKMAIHDLVT RQALKFYQQP IQPCRGDVEV
YRELLARFYN SEGKFLPTTT VIAMAERHGM SSELDKLVVI SALKILKENP TITGNFGINI
SAFSAHQDMF VAWLKDILGK QKYIASRLVF EINESGMQSN LGASYKFVRE VHSVGSRVSI
ERFGMSFTSF KFFSEVRPDF IKLDGSYTSN IDEDSNNKFF VRMMVDVARR IGIRVIATSV
ERQEEKLTLE KLLVDGLQGY YIAQPQAMAI TDQI
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