Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2063 |
Symbol | |
ID | 5373223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2473373 |
End bp | 2476030 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640830267 |
Product | electron transport complex protein RnfC |
Protein accession | YP_001366268 |
Protein GI | 153000587 |
COG category | [C] Energy production and conversion |
COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00525621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAACTT TATTAGATCA ATTAGATAAA GGAACCCTTT GGCGATCACC CGGTGGAATA CATCCTCCTG AAGTCAAATT CCTCTCCAAC GCGACGCCGA TTGGCCAACT TCCATTAGCC TCGACGTACT TAGTGCCTGT CCCTCAAGTT GGTGAAAACT GTACGCTTGC GGTGAAGGTT GGCGATAGCG TCTTAAAAGG CACGCCACTA ACGCAAGGCA CCTCGATTTG GCATTTACCT GTGCATGCGC CAACATCGGG CACTATTGTT GCTATCGAAC CAAGGGCGAG CAACCATGCC TCTGCATTGC CGGTTAACAC TTGCGTTATT GCAGCCGATG GCAAAGACAC CTGGTGCGAG TTAGTACAAA ATCAACTTGA TGACTTAAGC CATCAGCAAA TCGTTGATAA GGTACGCTCA GCCGGCATTG CCGGTATGGG CGGCGCAGCG TTTCCGACTC ATATTAAGCT TAATCCGGTC AGTGAAATCG ATTTAGTCAT CATCAACGGC GTCGAGTGCG AACCTTATAT CAGCGCCGAT GACAGATTAA TGCGCGAATA TAGCCAAGAT ATCCTCGCGG GTATTGGCAT AATTCATCGA CTATTAACGC CAAAACGCAT TGTTATCGCC ATTGAAGACA ATAAACCTGA AGCGGCCAAA GCCATGCAAG CTGCTGTCAG CCAATGCGGA CTCCCAGCGG GCAGCATTCG GGTCACGGTT ATCCCGACAA AATATCCTTC TGGCGGTGAA AAGCAGTTAA TTCAAATCAT TACTGGCCGC GAAGTGCCCT CGGGCGCCAT TCCCGCCAAA CTCGGTATCG TGGTACATAA CGTCGGTACT GCCTATGCAA TTAATCAAGC CGTCACTCAA GGCAAGCCTT TGGTTGAACG CGTTGTGACT GTGACAGGCA GAAATGTCGG CAAACCAGGG AACTACTGGT TACCGATAGG CACGCCCGTT GATCACGTTC TGACTGCAAC TGAATTCACG CCAGAGCCTG ACCAAAAGGT GATTATTGGC GGGCCTATGA TGGGCCATGC GTTAGCGAAT ATCCAAGTGC CTATTTTAAA AGGTACTAAC TGTATTCTGG TGCCAAGCAG CCAAGAAATT GGTAGCACGC CCGAAGAAAA AGCCTGTATC CGCTGCGGCG AATGCGCCAC TGCCTGCCCT GCACTCTTGT TGCCACAACA ACTCTTTTGG CACGCCAAGG CCGAAGAATA CGATAAAGCC GCCAGTTACA ATCTAAAGGA TTGTATTGAA TGCGGTTGTT GTAGTTACGT TTGCCCGAGT GATATTCCAT TAGTCGAGTA TTACCGCATT GCCAAATCAG CACTCAAACA TGCCGCCGAT GAGAAGCAGC AAGCAGAGCG CGCCAAACAG CGCTTCGATG CCCGCTTAGC GCGTCTTGAA GAAGAAAAAC TGGCCCGTGA AACTAAGGCG AAAGAGGCGT CTGAACGTCG ACAAGCCAGC ATGACAGGCA CAGATAAAAA TGCCGTCGCC GAAGCCATGG CACGCATCGC CGCGAAAAAA GCCGCAGCGG CACAAGCAGT CACTGGCGAA TCAATTAACG AAGAGTCAAG CGTCACAACA ACTGACACCA CGGAAGTGCC AAAAGGTAAG GCCGCAGTTG CCGCCGCCAT CGCCCGTGCT AAAGCGAAAA AAGCAGCCCA AGCAAATGCC GATGGCACTG ACACCAATGG TGCTGCAACT GACAGTGCTA AAACAGACAA TGCGGTGAAT ATTGATGCAA ACGACTCCAT CTCAGCAACA GTTGCGATAG CGCAGGAAGC GCCTTCATCC CAGAAAGACA AAGTCGCTGC GGCAATTGCG CGCGCCAAGG CCAAAAAAGC CGCACAGCAA ACAGATACCG CGCCGCTTGA ACCTGCAGAA ACCGCTGACA GCACATCAGA GCTCAGCGCT GCCGATGATA AAAAGGCGAA AGTAGCAGCA GCCGTTGCTC GTGCCAAGGC CAAGAAAGCG GCGCAGCAAG GAGAAACCGC CGCTAGCGAT ACTGAAGTTA GCAATACTGA CGTTAGCGTT AATGACGTTA ATGACGTTAA TGATGCTGAA GCGATTAAGA AAGCCAAAGT AGCCGCCGCG GTTGCCCGTG CTAAAGCGAA AAAAGCCGCC CAACAAGCTG AGACAAATGC TGAAAATGGT TTAAACCAGA CCGCGACTCC AGCAGTTGAT TCCGCAGCTA ACGTTCAAGC AGTTGTGAAT GCTGATGCAG AAACCGCTGT TAATGCAGCC GCTACTGATA TTGAAGTTAG CAACACTGAC GTTAGCGTTA GTGACGCTGA AGCGATTAAA AAGGCCAAAG TGGCTGCCGC AGTTGCTCGT GCTAAAGCGA AGAAAATAGC GGCTGCATCA GCAGAGTCTA AAACTGAGTC TGAAATAGAG TCTGTTGACG AGATTCGAGC TGAAGCTAAC GTGGCATCGC CCTCGATAGC AGCAACGCTT GAGACTGCAA TAACTGGAGC CGAAACCGTT TTGCCATCGG TAGAATCTGC TGCAGAGCCC ATTGAAACAG CGCCGTTATC CAGTGATGAA CTGAAAAAAG CGCGGATTGC TGCGACCATC GCCAAGGCAA AAGCCAAAAA AGCGGCACTC GCCCAAGAAG CCAATGCTTC GAGCGACTCA AGTGTAACTA ATGATTAA
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Protein sequence | MLTLLDQLDK GTLWRSPGGI HPPEVKFLSN ATPIGQLPLA STYLVPVPQV GENCTLAVKV GDSVLKGTPL TQGTSIWHLP VHAPTSGTIV AIEPRASNHA SALPVNTCVI AADGKDTWCE LVQNQLDDLS HQQIVDKVRS AGIAGMGGAA FPTHIKLNPV SEIDLVIING VECEPYISAD DRLMREYSQD ILAGIGIIHR LLTPKRIVIA IEDNKPEAAK AMQAAVSQCG LPAGSIRVTV IPTKYPSGGE KQLIQIITGR EVPSGAIPAK LGIVVHNVGT AYAINQAVTQ GKPLVERVVT VTGRNVGKPG NYWLPIGTPV DHVLTATEFT PEPDQKVIIG GPMMGHALAN IQVPILKGTN CILVPSSQEI GSTPEEKACI RCGECATACP ALLLPQQLFW HAKAEEYDKA ASYNLKDCIE CGCCSYVCPS DIPLVEYYRI AKSALKHAAD EKQQAERAKQ RFDARLARLE EEKLARETKA KEASERRQAS MTGTDKNAVA EAMARIAAKK AAAAQAVTGE SINEESSVTT TDTTEVPKGK AAVAAAIARA KAKKAAQANA DGTDTNGAAT DSAKTDNAVN IDANDSISAT VAIAQEAPSS QKDKVAAAIA RAKAKKAAQQ TDTAPLEPAE TADSTSELSA ADDKKAKVAA AVARAKAKKA AQQGETAASD TEVSNTDVSV NDVNDVNDAE AIKKAKVAAA VARAKAKKAA QQAETNAENG LNQTATPAVD SAANVQAVVN ADAETAVNAA ATDIEVSNTD VSVSDAEAIK KAKVAAAVAR AKAKKIAAAS AESKTESEIE SVDEIRAEAN VASPSIAATL ETAITGAETV LPSVESAAEP IETAPLSSDE LKKARIAATI AKAKAKKAAL AQEANASSDS SVTND
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