| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2048 |
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| Symbol | |
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| ID | 5372262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2453685 |
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| End bp | 2457497 |
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| Gene Length | 3813 bp |
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| Protein Length | 1270 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830252 |
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| Product | exodeoxyribonuclease V, gamma subunit |
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| Protein accession | YP_001366253 |
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| Protein GI | 153000572 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAGT TAATCCAGTC CAATCAGATG GAAGTGCTCT GCGCCCATTT AGCCGCTTAC
CTGACCCAAC CCCTTGCTTT TGCACGTCTA CTGAGTAACG AGCATATTCT GGTGCAGAGT
CCCGGCATGT CGACTTGGCT GCGCCTCGAA ATCGCCAAAC AAAATGGGAT TGCTGCCGCA
TTGGAATTCC CACTGCCGTC GAGCTTTACC TGGCAGTTGT GCCATGACTT ATTACCCGAT
GTGCCCAAGG ACAACGCCTT CACTAAGGCG GCGATGACGT GGAAGCTGAT GCAACTCTTG
CCGCGCATGT TACAAGATGA CGCCTTTGGG CCATTGAGAC ACTATCTAGG TAATACCCTA
GAAAATACGC CCACCATAAA TACCGCCGAC ACGTGTGAAC ATCTCAACAC CAGTGATATG
ACGGCTGACG ACATTAAGCT GTACCAACTC TGTGGCCGGA TTGCCGATAT CTTCGACCAA
TACTTAGTGT ATCGGCCCGA TTGGATTTTA GCGTGGGAGC AAAACGAGCA TCCCGACTCA
CTCACCAAAT CGCTGAATGA AGACCAACGC TGGCAACCTA TTTTATGGCG CGCGCTCATT
GCCTTTAACC GTGATGAGCT TAATCAAAGC CATTACCACA GGGCTAACCT GCACAGTGAC
TTGATTGCCG CGCTGAATAA CCCCGACACG TCACTCGCCC AATTGCCACA ACGCTTATTT
GTGTTTGGCA TTTCCTCAAT GGCGCCGCAA ACCCTTGAGG TGCTGTACCA TCTGGCAGGC
CGTATCGATG TGATCGTGCT TGGTTTAAGC CCGTGTCAAC ACTATTGGGG CGACATTGTT
GATCCCCGTA ATCGTGCCCG CATGGCGGTG CAATATGCGG GTAAACGCCA ATTAGCCGAA
CTGTGGGAAG AAAAACTCGA AGTGGGCAAT CCGCTGCTTG CCAATAACGG CAAGATGGGC
CGTGAATTAC TCGATATGCT GCTTGAGCTC CCCGCCGAAC ACTGCGACTT TGGCGACGAT
GTGTATTGTG AACCCTGCGA CGATCCCAAC GATCCACACA GTCATGCCAG CATGCTCCAC
GGGGTGCAAT ACGATATTTT AGAGATGCAA ACCTTAGACA GAGTGCTAGG GCCAGATGCC
GAGCTGTACC AAAATGTCGA GAACAGACGC CTGTTTAAGC GCGACGATCA ATCCATTCGA
GTCAAGAGTT GTCACAGCCC ACTGCGGGAA GTCGAAACCC TGCACGATCA CTTGCTTGAG
TTACTCAGCA ACCATGCCGA CCTGACACCC AAAGACATAG TGGTGATGAT GCCCGATGTC
GCCGCCTACG CGCCCTACAT CGATGCCGTC TTCTCGGCGA AGCAAGGCCT GCATTACATT
CCCTACGCCA TTGCCGACCG CGGCGCGGCG CAGGAATCAC CGCTCATCAA TAGCTTTTTG
AATTTACTTG GGATTAATCA AAGTCGTTTT GGTCTGACCG ACATTTTGAG CATACTCGAA
GTACCCGCCA TTTTGCGCCG TTTCCAGCTC GATGACGATG AATTGCAACT GATCCGCCGC
TGGTTAGATG AAGCGGGCGT GCGCTGGGGC CGAAATGAAC AAAGCCGCCT AAAACAAGGT
GTGCCAGCGT TTGAGCAAAA CTCCTGGGCC TTTGGTATTA AAAGGCTGAT TTTAGGCTAC
GCCTTGAGTG ACGATGCGCC GCTGTACCAA GACCATCTGA TCGTGACTGG CATCGAAGGC
CAATCGGCGC AGGCATTAGG TAAGTTACTC AATTTTATTG AAGTACTCGA TGAAACGGCG
CAAATACTCG CCTTACCGCA AGTGGGCGCC CTGCGCTTAG CGGAATTAAC TGAGTTGCTG
GATGCCTTCT ACGACACAGA TGAAGACGAG CGCGAGCAGT TACAGGAAAT CCGCGATGCC
ATTGCCGCCC TAGAGCAAGA GTTACTATCA GCGGGCAAGC CATTAGATAC AAACTCGTTA
GATACAAGTA TGTTCGTGAC ACTAGCCCAA CAGAGCATAA GCGGACTGAG CCTCAGTATC
GAAGTGCTAC AACAATGGTT TAATCAACGC TTAACCGAAT CTCGGGTCGG CCAGCGTTAT
CTTGCGGGAA GCGTGAACTT TTGTACCTTG ATGCCGATGC GCTCGATCCC CTTTAAGATC
GTGTGTTTAC TCGGCATGAA CGATGGGGTT TATCCTAGGG TTCAGCATCC TGTCGGCTTT
GATTTAATGG CGCACTTTGG TGCCCGTAAA GGCGATCGTT CCCGCCGCCT CGATGACAGA
TATTTGTTTT TAGAAGCCTT ATTGTCGGCG CGCGAGCAAC TGTATATCAG CTATATCGGT
CGCAGCGAAC GGGATAACTC TGAGCGTATC GCCTCTATGC TCGTCTCTGA ACTGATTGAA
TATTGTCAGC TGTGCTATTT GCCTGAATCG CTATTGGCTC AATCGCAGAA AGCTTCAAGC
CCCATAGACC CAGAAGATGC TGAAAAAGCC CTCTATAACG CGATCGTCAG CCACCAGCCG
CTGCAACCCT TCGATCCTAA GTTGTATCAA GCCGCAGTAA AAAGTGATGA CGAAAATAGC
TCAAAAATAG ATGGCTCAAG CATAAGTAAA AATGAGTCAG GCATAGGCCA AAGTTACAGC
CAGCAATGGT GTCCGCCCAA TGCGGACGCT GCGGGCACAC ATGCAGGCCG CTTTATCGGC
GCGCAAACTC GCATCATGCT CGAAGCGGAT GAGCAAGACT CAATGCCAGA TACAGAGGCA
CAGCCCGCTT CTGTGCGCGA ACAACAGCAA AGCAAGCAAG TGGATGTGTC TGCCCTGATC
CGTTTCTTTC GAAATCCGGC GCAGTACTTC TTCAACCGAA CGCTTAAAGT CGACCTTAGT
CTTAATATTC AGGCAGATGA TAATGACGAG CCCTTTAGCC TAAATGCCCT AGAGCGCTAT
ATGTTACAGG CCCAGTTACT CGACGATGCC ATAGGCCAAG GTCTGACTGA GCCCGATATC
GAGCTGATTA AACGCCTCAA AGCCAGCGGC AGTTTGCCGA TGCAGCCCTT CGATGATTTG
CTGCTACGCC AATATCAGCA CGATATTAAG CCTTTGATTG GCAGAACCTT GTTCCTCAAG
GGAGAACAAG CCAGCAGTCA TGCGGATATT AAACTCCTGT TTGACTTACC CATCACGGCG
GGTAAATCCC AGCAAGTGTT ACTGCAAGGC CGTATTGATG ACATCAGCCC TAAGGGATTA
GTGAATTACC GTCCCGGTAG CGCCCACGGC CGCGATGTGC TGAGGTTATA CCTTCGCCAC
CTGTGTTTAA TGGCAATGGG CCACACACAT GCAAGCTATC TACTCGACAT GGGGCATTTC
CACGCCTTAG CGCCAATCAC AGCTGAGCGC GCCCATGCGT TACTGGCCGA TTTGCTGGTG
CTGTTTTATC AAGGTCAGCA ATACCCACTG TGTTTTATGC CGCGCACCTC ACTGGCCTAC
GTCAGCAGCG AGGGTGAGCA CGATGAGCGT TTGCAGCAAG CGTTACCTGA ATGGCTGGAT
GAGCAGAGTC AATTAGGTGA AGGGAACGAG CCCCATTACC AACGCTTATT CAGTTTTCCG
CGGGATTTCT CTGAGAATAG CTTTGGCGTA TTAGCCGAGC GCATCTATCG CCCTATGGTG
AGTTTATATC TCAAAGATAC GCTGGCTCAG CTTGAGGAAT TTGCGCTGAA CGATGGCATG
AGCCAAGGCC AAACTCCCAA TGTACAAGCG ACTGAAACAC ACGCTACTGC AGCACATTTA
AACCGCGATA GCGCACAGGG AGAGCAAGCA TGA
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| Protein sequence | MLKLIQSNQM EVLCAHLAAY LTQPLAFARL LSNEHILVQS PGMSTWLRLE IAKQNGIAAA
LEFPLPSSFT WQLCHDLLPD VPKDNAFTKA AMTWKLMQLL PRMLQDDAFG PLRHYLGNTL
ENTPTINTAD TCEHLNTSDM TADDIKLYQL CGRIADIFDQ YLVYRPDWIL AWEQNEHPDS
LTKSLNEDQR WQPILWRALI AFNRDELNQS HYHRANLHSD LIAALNNPDT SLAQLPQRLF
VFGISSMAPQ TLEVLYHLAG RIDVIVLGLS PCQHYWGDIV DPRNRARMAV QYAGKRQLAE
LWEEKLEVGN PLLANNGKMG RELLDMLLEL PAEHCDFGDD VYCEPCDDPN DPHSHASMLH
GVQYDILEMQ TLDRVLGPDA ELYQNVENRR LFKRDDQSIR VKSCHSPLRE VETLHDHLLE
LLSNHADLTP KDIVVMMPDV AAYAPYIDAV FSAKQGLHYI PYAIADRGAA QESPLINSFL
NLLGINQSRF GLTDILSILE VPAILRRFQL DDDELQLIRR WLDEAGVRWG RNEQSRLKQG
VPAFEQNSWA FGIKRLILGY ALSDDAPLYQ DHLIVTGIEG QSAQALGKLL NFIEVLDETA
QILALPQVGA LRLAELTELL DAFYDTDEDE REQLQEIRDA IAALEQELLS AGKPLDTNSL
DTSMFVTLAQ QSISGLSLSI EVLQQWFNQR LTESRVGQRY LAGSVNFCTL MPMRSIPFKI
VCLLGMNDGV YPRVQHPVGF DLMAHFGARK GDRSRRLDDR YLFLEALLSA REQLYISYIG
RSERDNSERI ASMLVSELIE YCQLCYLPES LLAQSQKASS PIDPEDAEKA LYNAIVSHQP
LQPFDPKLYQ AAVKSDDENS SKIDGSSISK NESGIGQSYS QQWCPPNADA AGTHAGRFIG
AQTRIMLEAD EQDSMPDTEA QPASVREQQQ SKQVDVSALI RFFRNPAQYF FNRTLKVDLS
LNIQADDNDE PFSLNALERY MLQAQLLDDA IGQGLTEPDI ELIKRLKASG SLPMQPFDDL
LLRQYQHDIK PLIGRTLFLK GEQASSHADI KLLFDLPITA GKSQQVLLQG RIDDISPKGL
VNYRPGSAHG RDVLRLYLRH LCLMAMGHTH ASYLLDMGHF HALAPITAER AHALLADLLV
LFYQGQQYPL CFMPRTSLAY VSSEGEHDER LQQALPEWLD EQSQLGEGNE PHYQRLFSFP
RDFSENSFGV LAERIYRPMV SLYLKDTLAQ LEEFALNDGM SQGQTPNVQA TETHATAAHL
NRDSAQGEQA
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