Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2047 |
Symbol | |
ID | 5372261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2449867 |
End bp | 2453688 |
Gene Length | 3822 bp |
Protein Length | 1273 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640830251 |
Product | exodeoxyribonuclease V, beta subunit |
Protein accession | YP_001366252 |
Protein GI | 153000571 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.680974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAC AGATTCAGTT AAACGCAGCG GCGTTACATT CAGCACCACA GGCGCTTGAT CCACTCACAT TGCCCTTTGG CGGTAGTCGT CTGATTGAGG CCAGCGCAGG CACTGGTAAA ACCTACACGA TTTCAGGTCT TTATTTACGC TTATTGCTTG GTGATGGCAT AGCAGCGCCG CTGACCTGTG AGCAGATTCT CGTGGTTACC TTCACCAATG CGGCCACCGA AGAGCTAAGG GATCGTATTC GTCGGCGTAT TCAAGTCGCC TTTAAGTGCT TCTTAGGGCT AACGATTGCC GATCCCTTTG TGCAGGCGTT GTATGACAAC ACCCCAGAGA GTGAACGCGC TATTGCCCTG CGGCGATTCG ATCTCGCCCT TAAATCCCTC GATGAAGCGG CAATTTTTAC CATTCACGGT TTCTGTCAGC GAATTTTATC GGATCTCGCC TTTGAGTCTT CCTTGCTGTT CGAATCGGAC TTTACTTTGG ACGACAGCGA ATTTTTGCAC CATGCGGTGC GGGATTTTTG GCGTGAGGCC TGTTATCCGC TGCCCGATTA CTTAGCGCAA ATCATTGCTA AGGAATTTGG CGAGCCCGAT GGTTTGGTCA AACAATTGCG GCCGCTCCTT GGCGCCAGTC AAGCAAAGCC TCTGAAACCC GCGCTTAAGT TTGATGCCTT GGCCCTATCA CTGCGCCAAA GTTTAGAGCG CTTTAAATTA GCTTGGCCGC GGGGACGCGA TGGCTTATTG GCATTGCTAC ACGGTTTGCC GCTGAACGGC ACCCGCTTTG GCAAGGCAAC GGATAAGTAC CCCAAACTCG CCGCCATGTT CGATGCGCTG GATAACTGGC TCGCCTTCGG TCATGGGTTG CCGCCACTGA AAGAGTTAGA AGCCTTGTCC TTGTCTGAGT TAAAGCTCAA CAAGGGCGGC GTGATCCCAA GTGTGAGCGA AGCACCGCTG ATGGATCATA TGGAGCAACT TGCCACATTG ATTGCCGCCA TTAAACCGGC GTTTTTGTAT AGTGCGAAAC TTGGTATAAG CGAGCGATTT GCCCAGCAAA AGCAGCAAAA AAACGTGCTG ACTCCAGATG ATTTGCTCAC GACATTAGCA AGCGCGCTAC ATGCCAATAA TGAAACCTTG CCCAAAGCCG TGGCAACACG TTTCCCCGTC GCGCTTATCG ATGAATTCCA AGATACCGAT CCACTGCAAT TTGCGATCTT CTCTGGCATC TACCAAGGCC GCTACTCGTT TGAGCAGCAA GGTGTAGATA CTACAGAGAA CAAGCTCAGC CTGTTGATGA TTGGCGATCC TAAACAAGCC ATTTATGCCT TTCGCGGCGC CGATATCCAT ACCTATATTG AGGCCCGTCA TCATACGCAG GCCCACTATC ATCTGGATAC CAACTACCGC TCAAGCGCAA ACATGGTCGC TGGAGTTAAC CATCTGTTTA GCCAGCATAA TGATCCTTTT ATCAGTCAAT CGATCCCCTT TGATAGCGTG AAAACGCCCA GCAGTGCCAA GGGGAAAACC CTCACTGAAA AAACAGCTAA TCCTGCTGCC TTAAGACTAA GACTCTTAAG CGAAAGCGCA GAAAACGGCC TCAACAAAAC CACCGCCAGA CACTTGCTCG CCGAAGATGC AGCAGCGGAG ATCACCCGTT TACTGACAGA TGCGGCCAAT GGCGAATGCC ACAGCCCGAA AGGAGCTTTG ATCGCTAAAG ACATCGCTAT CTTAGTGCGG GATCGCAACG AAGCGGCGGT GATGAAAACC GCATTGAGTA AACGTCATAT AGGCGCAGTG TTTTTAAGTC GTGACAGTGT GTTCGATACC CTTGAAGCGC GGGAAATGGC GTTAATTTTA CGATCTCTGG CGAATCCTAA GGATGAACGG GCATTGCGCA GCGCCCTAGC CACGGCATTA TTGGGCTACA GCGCCGAGCA AATTCATGCC TTCAACCAAG ATGAAGAGCA CAGACAGCTG TTATTAGAGC AGTTTTTTAA CTTGCACCAA GTGTGGCAAA AACGCGGCAT CATGCCCGCG CTATTAAGCC TTGCCAATAG CACTAAGCTG ATTGACCGTT TACTGCACTC CGCTAGTACG CAAACCGATG CACAGGAGCA AGATGCCACG AATGGCGAGC GCCGTTTGAC GGATTTTCGT CACCTTGCCG AGCTATTACA GCAAAAGGCG ACTGAGCTTG ATGGTATTAG CGCCCTGCTC AATTGGTATG AACAGCAACT GATTGATAAC ACGGGAACCG ATGAACAGCA GCTGCGCCTT GAGAGCGAGC AGAATCTGGT GCAGATCGTT ACTATCCATA AGAGTAAGGG CCTTGAGTAC CCCGTGTGTT TTGTGCCCTT TGTCAGCCTA GCCCGCGACA ATCGCCGCCG CCCGACGCCT ATGCTGTACC ACAGAACCAA CGACGCAGGT GAGCAAGAGC TAGTATGGGA TATCGAAGGC ACGGATGAGG GTTGGGAGCG CGCCAAACAA GAAACCTTGG CCGAAGACTT GCGCTTGCTA TATGTGGCGC TCACTCGCCC TGTGTATTTG TGTTACTTGT ATATCGCCAA TCACAGTCGT CAACTTAAAA ATGGCCTTAA AAGTCAGCTG CATGAAACCG CCATCGGCTA TCTGCTCGGC ATAGGCGACT CAGAATGTGA CTTTGCCCGT ATCTGCAATG CTGCGCAGCA GCTCGCCCAA GATGTGGAAG CCATAAGTAT TGATAAGGTG CCCGATGACA TAGACGAGCG GCCATTGCCC TTAAGCCAAG ACATAGCACA AATACTGAGC GCGAAAACCT TAACCCGCCA ATACAGCACG CCATGGCGAG TCGGCAGTTA TTCAGGCCTA GTTAAAAATA CCAGCCATGG TAAAGCCGCT CCGGGCGCCG ATGATGAAAC ATTAGGCACA CTTGAATATA TGGCTGCGCA AACACTCTCT ATTCCTGATG AGCCAAGTCA TGAGCTGCAG GATGGCATGC TCAATCGATT TAACTTTGAG CGCGGTGCTA ACGCAGGTAG TTTTATGCAC TTAGTGCTAG AAGAGATTGA TTTTACGCAG GCAGACAGAG ACTTACCGCT ACAACTGCCT AAAGCTATGC TGAAATACGG TATCGCACCC GAGTGGCAAA CGGTATTGCA CACTTGGTAT CTGGATGTGC TGCACGCGCC GCTTGGGCTC ATGCCGACAA CAATGTCATC AACAACAGTG CCAACGACAA TGCCTTCAAC ATCGGCCTTC GAGAATAATT CCAAGACGGC CAAACCTGAA CATCCAGGAC TATGCTTAGC CAAGTTATCG CCGCAGGATA CCTTGGTCGA AATGGAGTTT TATTTACCCC TAAGTGAACT TAAGGATACT GAGCTCAATG CGCTACTGCA GCAGTTTGGC TATGAATCAA CACTTAAGTT TGATGATCTC AAGGGCATGC TCAAAGGCTT TATCGATTTA ACCTTTGAAT ACCAAGGAAA ATATTATATC GCCGACTATA AGTCGAATCA TTTAGGCGAC AACATCAATG CCTATCATCA GAGCGCGCTG CAAAGTGCCA TAACCGATCA TAGGTACGAT TTGCAGTACA TCCTCTACTC ATTGGCGCTG CACAGATATT TGAGTTTACG CCTGCCAAGT TATGACTACG ACAGCCACAT CGGCGGTTGT TATTACTTGT TCTTACGGGG TATGTCGGCT CAATATCCCG GCTATGGTAT TTACTACGAC AAGCCGCCGA AGGCACTTAT TCTCGCGCTG GATTCACTTT TTAATGACAA TTTATTTCAC AGCGGATTAG CTGGTGCAAT CGATACAGGA GTCACGGCAT GA
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Protein sequence | MSEQIQLNAA ALHSAPQALD PLTLPFGGSR LIEASAGTGK TYTISGLYLR LLLGDGIAAP LTCEQILVVT FTNAATEELR DRIRRRIQVA FKCFLGLTIA DPFVQALYDN TPESERAIAL RRFDLALKSL DEAAIFTIHG FCQRILSDLA FESSLLFESD FTLDDSEFLH HAVRDFWREA CYPLPDYLAQ IIAKEFGEPD GLVKQLRPLL GASQAKPLKP ALKFDALALS LRQSLERFKL AWPRGRDGLL ALLHGLPLNG TRFGKATDKY PKLAAMFDAL DNWLAFGHGL PPLKELEALS LSELKLNKGG VIPSVSEAPL MDHMEQLATL IAAIKPAFLY SAKLGISERF AQQKQQKNVL TPDDLLTTLA SALHANNETL PKAVATRFPV ALIDEFQDTD PLQFAIFSGI YQGRYSFEQQ GVDTTENKLS LLMIGDPKQA IYAFRGADIH TYIEARHHTQ AHYHLDTNYR SSANMVAGVN HLFSQHNDPF ISQSIPFDSV KTPSSAKGKT LTEKTANPAA LRLRLLSESA ENGLNKTTAR HLLAEDAAAE ITRLLTDAAN GECHSPKGAL IAKDIAILVR DRNEAAVMKT ALSKRHIGAV FLSRDSVFDT LEAREMALIL RSLANPKDER ALRSALATAL LGYSAEQIHA FNQDEEHRQL LLEQFFNLHQ VWQKRGIMPA LLSLANSTKL IDRLLHSAST QTDAQEQDAT NGERRLTDFR HLAELLQQKA TELDGISALL NWYEQQLIDN TGTDEQQLRL ESEQNLVQIV TIHKSKGLEY PVCFVPFVSL ARDNRRRPTP MLYHRTNDAG EQELVWDIEG TDEGWERAKQ ETLAEDLRLL YVALTRPVYL CYLYIANHSR QLKNGLKSQL HETAIGYLLG IGDSECDFAR ICNAAQQLAQ DVEAISIDKV PDDIDERPLP LSQDIAQILS AKTLTRQYST PWRVGSYSGL VKNTSHGKAA PGADDETLGT LEYMAAQTLS IPDEPSHELQ DGMLNRFNFE RGANAGSFMH LVLEEIDFTQ ADRDLPLQLP KAMLKYGIAP EWQTVLHTWY LDVLHAPLGL MPTTMSSTTV PTTMPSTSAF ENNSKTAKPE HPGLCLAKLS PQDTLVEMEF YLPLSELKDT ELNALLQQFG YESTLKFDDL KGMLKGFIDL TFEYQGKYYI ADYKSNHLGD NINAYHQSAL QSAITDHRYD LQYILYSLAL HRYLSLRLPS YDYDSHIGGC YYLFLRGMSA QYPGYGIYYD KPPKALILAL DSLFNDNLFH SGLAGAIDTG VTA
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