| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2017 |
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| Symbol | |
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| ID | 5373221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2404833 |
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| End bp | 2406815 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640830222 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001366223 |
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| Protein GI | 153000542 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000155921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAAC AAATCACGGG TATGTTAGCG CTGATTGGGG TGTTATCGCT TTTTTGTCAA
TGGCTTGGTT GGAAACTGCG GTTACCGGCG ATTTTGCCCT TACTGCTCTG TGGACTCACC
CTCGGCCCCG GACTTGGCTT CCTTAATCCC GATGCTATTT TTGGCAATTT ACTCTTTCCG
ATCATTTCTC TCGGGGTTGC CGTGATTTTG TTTGAAGGCG CATTGACTCT CAACTTTAAA
GAAATCAAAG ATCATGGTCG TATGGTGACG CATCTTGTGA CCATAGGGAC AGTGATCACT
TGGGCTTGTA TCAGCACGGC CACCTTTTAT TTACTCGATT TTAGTTGGGA AATTGCACTC
CTCTTTGGCG CATTAGTGGT GGTGACGGGG CCGACGGTTA TCGTGCCTAT GCTCAGAAGT
GTGCGCCCCA AATCCCAATT GGCGAGTATT TTACGCTGGG AAGGCATTGT CATCGACCCC
ATAGGCGCGC TGCTCGCAGT ATTAGTTTTT GAATATATTA CAGTTTCAGG CGATCAGACA
ACGCATGTGC TTTATGCCCT AGGTTCAATG CTTTCTCTAG GATTAGGACT TGGAGCGGCA
GCAGGTTACC TCACTGGGCA AATATTAAGA CGCAACCTGT TGCCACATTA TTTGCGCAAT
ACCGCAGTCT TAACCTTAAT GCTCGGCATC TTTGTCGGTT CGAACCTATT ACAGGAAGAG
TCGGGTCTAC TGACTGTGAC CGTTATGGGC ATTTGGCTTG CCAATATGCG CGGTGTGGAT
ATTGCTGAAA TCCTTGAGTT TAAAGAGACC TTAACCGTAC TACTGATTTC GGCACTGTTT
ATTTTATTGG CGGCGCGATT AGATTCTAAT GCCATGCTCG ATTTAGGTTG GGGTGGACTA
GGCGTTTTAG CAGTCACTAT GTTGTTAGCA CGGCCGCTGA GTATTTGGGT TTCTGGTATC
GGCACCTCTT TGTCGAGGGC TGATAAGTGG TTTTTATGCT GGATTGCGCC CCGAGGCATA
GTCGCTGCGG CGGTATCGTC ATTGTTTGCG ATTAAGTTAG AAGCCAACAA TGTGCAAGGC
GCCGATGCGA TTGTGCCCTT AGTGTTTTTA ATTATTATCG GCACGGTCGT TATCCAAAGT
TTAACCGCGG GACGTTGGGC GCGATTCCTC GGTGTCAAAG CCGATTCTGC CCAAGGTTTA
TTGATTTTCG GTGCTTCTAA ATTTTCCCGT GAGTTAGCGA AAATCTTAAA AGCCAAGGAT
GTCAAAGTGC TATTGGCTGA TAATAACTGG GATAATATTC GCCTAGCACG TATGGATAAT
ATCCCGGTGT ATTTTGGCAA TCCCGCATCT GAACATGCTG AAACCTATAT GGATTTAACT
GGGATTGGCC GCGTGTTGAT CATTTCGCCT TATCGACAAT TAAACCCTCT AGTGAGTTTC
CATTTTCAAG ATTTCTTTGG CACTAAGAAG GTCTTTGGCT TAAATAATAC CGAAGTGGGC
AGTGCGCGCC ACCAGCTCTC TGAAACTTAT AAGCAGCGCT TATGTCTGTT TGGTGATGCC
GTGTCCTATG CCAAGATTGC AAGCCTGATG GCGAGGGGCG CTCAACTTAA AGTGACCAAT
TTAACCGAAA ACTTCAGCTT TGAGCATTTC CGTAAGCGTT ACGGTGAAAC GGCTATGCCA
TTGGTTTATT TAACCAAGGA AGGTAAGGTC GTCGTAGTAT CAGGTAATGA TACTGTGTTC
CCGAATGGTA TTGAGCTGAT TAGCCTGTTG CCGATTGAAG CCTTAGAAGA AGCCAAAGTA
CAGCAAGCGA TTGCAGAGCG AGAAGCACTG GAAGCCCAAG AGAAATCCGC CGCAGAAGCC
GCTTTAGCGA AGGCAAAAGC GGAAGAGGAG GCTGAGCAAT TAAGGCTCGA GAAATCAGAC
GCTAACACTG TAATAAATGA CGAAGCTGAC AAGGGTGTGG TGGATAACAT GATAAAGAGT
TAA
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| Protein sequence | MVEQITGMLA LIGVLSLFCQ WLGWKLRLPA ILPLLLCGLT LGPGLGFLNP DAIFGNLLFP
IISLGVAVIL FEGALTLNFK EIKDHGRMVT HLVTIGTVIT WACISTATFY LLDFSWEIAL
LFGALVVVTG PTVIVPMLRS VRPKSQLASI LRWEGIVIDP IGALLAVLVF EYITVSGDQT
THVLYALGSM LSLGLGLGAA AGYLTGQILR RNLLPHYLRN TAVLTLMLGI FVGSNLLQEE
SGLLTVTVMG IWLANMRGVD IAEILEFKET LTVLLISALF ILLAARLDSN AMLDLGWGGL
GVLAVTMLLA RPLSIWVSGI GTSLSRADKW FLCWIAPRGI VAAAVSSLFA IKLEANNVQG
ADAIVPLVFL IIIGTVVIQS LTAGRWARFL GVKADSAQGL LIFGASKFSR ELAKILKAKD
VKVLLADNNW DNIRLARMDN IPVYFGNPAS EHAETYMDLT GIGRVLIISP YRQLNPLVSF
HFQDFFGTKK VFGLNNTEVG SARHQLSETY KQRLCLFGDA VSYAKIASLM ARGAQLKVTN
LTENFSFEHF RKRYGETAMP LVYLTKEGKV VVVSGNDTVF PNGIELISLL PIEALEEAKV
QQAIAEREAL EAQEKSAAEA ALAKAKAEEE AEQLRLEKSD ANTVINDEAD KGVVDNMIKS
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