Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2014 |
Symbol | rnhA |
ID | 5371911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2401538 |
End bp | 2402008 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640830218 |
Product | ribonuclease H |
Protein accession | YP_001366220 |
Protein GI | 153000539 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000135342 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAC TAAAACTGAT CCACATCTTC ACCGACGGCT CTTGCTTAGG CAATCCCGGT CCTGGCGGCT ATGGCATTGT AATGAATTAT AAAGGCCATA CAAAGGAGAT GTCCGACGGT TTTGCGCTCA CGACCAATAA TCGCATGGAG TTATTAGCCC CGATCATCGC GTTAGAAAGC TTAAAAGAGC CTTGCCAAGT CGTACTCACC AGCGACAGCC AATATATGCG CCAAGGCATA ATGACGTGGA TCCATGGCTG GAAGAAAAAA GGTTGGATGA CATCAAACCG TACCCCAGTC AAAAACGTTG ACCTGTGGAA ACGTTTAGAT AAAGCCTCAC AGATGCACAC CATCGACTGG CAATGGGTTA AAGGTCACGC AGGACACGCC GAAAACGAAC GTTGCGACGT ATTAGCTCGC ACTGCGGCTG AATCAAAACC GACCCAACCC GACTTAGGCT ACCAGCCTTA A
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Protein sequence | MTELKLIHIF TDGSCLGNPG PGGYGIVMNY KGHTKEMSDG FALTTNNRME LLAPIIALES LKEPCQVVLT SDSQYMRQGI MTWIHGWKKK GWMTSNRTPV KNVDLWKRLD KASQMHTIDW QWVKGHAGHA ENERCDVLAR TAAESKPTQP DLGYQP
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