| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2004 |
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| Symbol | |
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| ID | 5370454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2389168 |
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| End bp | 2390571 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640830208 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001366210 |
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| Protein GI | 153000529 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0563026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTTT CCAAACTTGG ATTAAGCAAT CCGATTTTAA GAGCCATCAC TGAGCTCGGC
TATTCACAAC CTACTCCAAT CCAAGAAAAA GCCATTCCGG TGATCTTGAA AGGTAAAAAC
CTGCTGGCTG GCGCGCAAAC GGGTACAGGT AAAACCGCCA GTTTTGTGTT GCCAATACTG
CAAATGTTCG CCGATATGCC GAAAATTCGG GCTAAACGCG TTCGCGCCTT GATCTTAACC
CCAACCCGCG AATTGGCCGT TCAGGTTGAA GACAATATTG CCAAATACGC AAAATACCTG
CCGCTGACCT CTATGGCCAT GTATGGTGGC GTCGATGCCG CACCACAGAA ACAAAGTCTT
ATTGAAGGCG TCGATATTCT GGTGGCGACA CCCGGTAGAT TGCTCGATAT GTATACCCAA
AGAGCGATTC ATTTCGATGA GATCTCGGTA TTAGTTCTAG ACGAAGCCGA TAGAATGCTC
GATATGGGAT TTATCGAAGA CATCAATAAG ATCATCGAAC GTCTGCCAAC AGAACGCCAA
AATCTGTTGT TTTCGGCAAC CTTATCTAAG CAAGTGCGCT TTTTAGCGAA AACAGCGGTT
GAAAACCCTG TTGAGATTGA AATTGCCCGC GACAGTGCGA ACGCACCACA AATCGACCAA
TGGTTGATCA CAGTCGATAA AGACAAAAAG TCTGCCCTGT TAAGCAAACT CATCACTGAG
CAAGCGTGGG AACAGGCGCT GATCTTTATC CAGACTAAAC AAGGCGCCGC CAAACTGGTC
AGCCAACTCG AAAAACGCGG TATTGCCGCC GAAGCCATCC ACAGTGGTCG CAGCCAAGCG
GTACGCGAGC AGTTATTAGT CGATTTCAAG TCCGGAAAAC TGCGCTTTTT AGTTGCGACC
GGCGTGGCTT CTCGCGGTAT CGATATCGAC GCCCTTACCC GCGTGGTCAA CTATGATCTG
CCCGATGAAG CCGATGATTA TATTCACCGT ATTGGCCGAA CCGGTCGTGC TGGCGCCTGC
GGCGAAGCCA TCTCCTTTGT TTCCAAAGAT GATTTTAGAA ACCTGTGTGC TATCGAGCGC
CGCCTAGGCC ACATCATAGT GCGTAAAGAA ATTGAAGGCT TTGTGCCGAA CAAAGAAGTG
CCAGTTTCTA TCCTCGATTT TGTGCCGAAA AATACCACGC CAAAAACCTT TAAAGCCCGC
GCACCTGAGG CTAAAACCTC ACGCCCCGCG AAAGAAGGCT CCTTTGAAAC CGCCCATGCG
AAAAAGCATC GCAGCGCGAA ATCAAAGCCT GAGGCAAAAG CCACTGTAGC GCGGCCACAA
TCCACACAGG CTGAAAACAG TAGCGAGAAT ACGGGTCGCA GTGCACCCTT TAATCCATGG
AACAGCGGCC CTAAAAAAAA CTGA
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| Protein sequence | MPFSKLGLSN PILRAITELG YSQPTPIQEK AIPVILKGKN LLAGAQTGTG KTASFVLPIL
QMFADMPKIR AKRVRALILT PTRELAVQVE DNIAKYAKYL PLTSMAMYGG VDAAPQKQSL
IEGVDILVAT PGRLLDMYTQ RAIHFDEISV LVLDEADRML DMGFIEDINK IIERLPTERQ
NLLFSATLSK QVRFLAKTAV ENPVEIEIAR DSANAPQIDQ WLITVDKDKK SALLSKLITE
QAWEQALIFI QTKQGAAKLV SQLEKRGIAA EAIHSGRSQA VREQLLVDFK SGKLRFLVAT
GVASRGIDID ALTRVVNYDL PDEADDYIHR IGRTGRAGAC GEAISFVSKD DFRNLCAIER
RLGHIIVRKE IEGFVPNKEV PVSILDFVPK NTTPKTFKAR APEAKTSRPA KEGSFETAHA
KKHRSAKSKP EAKATVARPQ STQAENSSEN TGRSAPFNPW NSGPKKN
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