| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1938 |
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| Symbol | |
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| ID | 5371796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2315014 |
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| End bp | 2315601 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640830141 |
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| Product | NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome |
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| Protein accession | YP_001366144 |
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| Protein GI | 153000463 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00561646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGATA AACTGAAAAA AATCTGGCAG GTACTCAATC GTCCGAGTGT GCATTACAGT
TTAGGTTTTT TGACCTTAGG TGGCTTTTTG GCTGGAGTGA TTTTCTGGGG CGGCTTTAAC
ACAGCCCTTG AAGCGACCAA CAAGGAAGCC TTCTGTATCA GTTGCCATGA AATGGAAAAC
AACGTCTATC AAGAGTTACA GACGACAATT CACTTTACTA ACCGCAGCGG TGTGCGGGCA
ACGTGCCCTG ACTGCCATGT GCCGCATAAC TGGACCGATA AAATCGCCCG TAAGATGCAG
GCCTCTAAGG AAGTGTGGGG TAAGGTTTTC GGTACGATTA ATACCCGAGA CAAGTTTGAA
AGTAAACGGC GTGAACTGGC TGAGCATGAG TGGGCGCGGT TAAAGGCCAA TGACTCGCTC
GAGTGCCGTA ACTGCCATAA CTTTACGTAT ATGGACTTTA CCCGCCAATC ACCTAGAGCG
GCGCAGATGC ACTCAACGTC ACTGGCGAGC GGCGAAAAGA CTTGTATCGA TTGCCACAAG
GGGATTGCTC ACCATCTCCC CGATATGGCA GGTGTGAAGG GCTTTTAA
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| Protein sequence | MLDKLKKIWQ VLNRPSVHYS LGFLTLGGFL AGVIFWGGFN TALEATNKEA FCISCHEMEN
NVYQELQTTI HFTNRSGVRA TCPDCHVPHN WTDKIARKMQ ASKEVWGKVF GTINTRDKFE
SKRRELAEHE WARLKANDSL ECRNCHNFTY MDFTRQSPRA AQMHSTSLAS GEKTCIDCHK
GIAHHLPDMA GVKGF
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