Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1919 |
Symbol | |
ID | 5371055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2286448 |
End bp | 2287353 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640830122 |
Product | ApbE family lipoprotein |
Protein accession | YP_001366125 |
Protein GI | 153000444 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000213083 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACAT CATCCCTAAA AACCGCACTT TATTCGCTGC AACGCCGTGA TTGGGGTTAT GTGGGCGAAT TTAGGGCCAT GGCGAGTCCC TGTGAAATAC TCATTGCATG TGATCAACTC GATATCGCCG ACGATATGTT GGATATGGCC GTCACTGAGG CGCTGCGTAT TGAACATAAG TACAGTCGCT TTATTGCGCA GAATTGTCTG TGGCAATTAA ACCATGCCTA TGGTCATAAG CAGCTTATCG ATGAAGAAAC CTGGCAGTTA TTGGCTTTTG CCAAACAATG TTTTCAGCTC AGTGATGGAC TATTTGATAT CTCTGCAGGG CCGTTAATGG AACTGTGGCG CTTTGATCCC AAAGCCCAAT TGCCCGAACA TGCCCGCATA CTTGCCGCTA AAGCCTTAGT GGGGTTTGAG CGTATCGAGT TTGATTCGCG CCATATTGAG ATGCCAACGG GAATGAAATT GGATTTTGGC GGCGTTGCTA AGGAATATGC AGTCGATAGA GTCGCCTATG AGTTGGCTGA ATGTTATCCA GATATTCCTG TGCTAGTGAA TTTTGGTGGC GATATCGCCT GTCCTGTGCC CAAAGTGAAC CCATGGCAGG TGGGCATTGA AGATCCTCGC CATCTCGATC GCGCCGCCAG TGTACTGGCG ATCAGTCAGG GCGCATTAGC GACCAGCGGC GATACACGGC GCTTTTTTGA AGTAGATGGA AAGCGTTACG GCCATATTGT CGATCCGCGT ACTGGCTATC CCGTCGTCCA TGCGCCGCGC TCCGTGACTG TGTTAGGACC AAACTGTGTG ACCGCTGGAA TGCTGGCGAC TATGGCCATG CTACAGGGCC AGGATGCGGA AGCATTTTTA CAGCAACAAG ATGTTAAGTT TAGTATTTTC CGTTAA
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Protein sequence | MSTSSLKTAL YSLQRRDWGY VGEFRAMASP CEILIACDQL DIADDMLDMA VTEALRIEHK YSRFIAQNCL WQLNHAYGHK QLIDEETWQL LAFAKQCFQL SDGLFDISAG PLMELWRFDP KAQLPEHARI LAAKALVGFE RIEFDSRHIE MPTGMKLDFG GVAKEYAVDR VAYELAECYP DIPVLVNFGG DIACPVPKVN PWQVGIEDPR HLDRAASVLA ISQGALATSG DTRRFFEVDG KRYGHIVDPR TGYPVVHAPR SVTVLGPNCV TAGMLATMAM LQGQDAEAFL QQQDVKFSIF R
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