| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1912 |
|---|
| Symbol | |
|---|
| ID | 5371362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2279693 |
|---|
| End bp | 2280250 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640830115 |
|---|
| Product | hydrogenase expression/formation protein |
|---|
| Protein accession | YP_001366118 |
|---|
| Protein GI | 153000437 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.816191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAT TGCTACTCGG TATTGGCAAT GTCCTGTACG CCGATGAAGG CATCGGCGTG
CATTTTGTCA ATTATATAGC TGATAATTAT CAGTTTACCC ATGAGTCTCA CCAGCTGAAG
CTGCTCGATG GCGGCACCTT GGCTCAGGGG CTCATTCCCA TTATTTGCCA ATATGATTAT
TTAATCGTGG TCGATACTGT CAATGCCAAT GGCGTAGAAG CGGGCGAGGT CTACTTCTTC
GATTTTGATA AGGCTCCGAA GGAAATCGAC TGGCAAGGCA GCGCCCATGA AGTCGAAATG
CTGCAAACCC TCAATATGAT GGAAATGGTT GGCGACAGAC CTAAGACCTT TGTGCTGGGC
GTCACCCCAA CCGTGCTCGA ACCTATGGTG CTGGGCTTGA CCCCTAAAGT CGCCGCCGCA
GTGCCGTTGA TGGAATCAAG CTTGCTATCC CACTTAGCCT CACTTGGGTT CACTGCGACG
CGTATTGCCG ATCACAGTAT CGACTCGCTG ATCCCTGACT CTTATAAACG CGGCGTTACT
ACTGGTGAAA GTATATAG
|
|---|
| Protein sequence | MKILLLGIGN VLYADEGIGV HFVNYIADNY QFTHESHQLK LLDGGTLAQG LIPIICQYDY
LIVVDTVNAN GVEAGEVYFF DFDKAPKEID WQGSAHEVEM LQTLNMMEMV GDRPKTFVLG
VTPTVLEPMV LGLTPKVAAA VPLMESSLLS HLASLGFTAT RIADHSIDSL IPDSYKRGVT
TGESI
|
|---|
| |