Gene Shew185_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1888 
Symbol 
ID5372788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp2253053 
End bp2253781 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content50% 
IMG OID640830091 
Producthypothetical protein 
Protein accessionYP_001366094 
Protein GI153000413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.169279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAAC ATCAACAAAA GCCTCCCCGT TCTACCTCGC GATTTTCCTC TTCTAAATTA 
ACAGGTTTAG CTGCCAGCGG TGTACCAAGC CGTGGCTTGT TTATTATCGA GCTGGTGGTG 
GCGTTACTCA TCACTCGCAT TCCCTATTTA AGCGTGCCGT TTAAATGGCT TGAAAGCTAT 
TTCCATGAAT TGTCCCACGG CATTGCGACG ATATTAAGCT CGGGTGTGGT CAGCCATATT 
CAATTGTTTC CTAACGGCGC AGGCTTTTGT TTTAGCCAAG GCGGCTCGCC GATGTTGATT 
GGTTTTGCTG GGTATTTTGG CGCGGCCTGT TGGGGATATT TAATCTACTT GCTCGCGACT 
TGGCCAAAAG GGATCCGCGT GAGCTTTGCC TTGCTGGGCG CTTTAGTGGT GCTAAGCGGC 
TTGCTTTGGG GAAGGGATAT CCTCACGCTG GCGATTCTAG CCGTACTCAC TATTATTTTG 
TTGTTACCGC TTAAACTCAG TCAAAACAAG ATGTTGACCC AGTTTCTACG TATTGTTGGC 
TTGATGATTA TGCTCAATGC GCTGGCAAGT CCAACTGTGT TGCTCGGGCT TGATGGCCAA 
GGTGATGCGG TGATGTTGGC CGAACGTTCT TGGATCCCCG CGTGGATTTG GGTGGGACTT 
TGGTTATTAA CCAGTGCCTG CGCCTTGTAT TTTGCGTGGC GCCGTGTGGA TAACGCTGCG 
AGTCGCTAA
 
Protein sequence
MLEHQQKPPR STSRFSSSKL TGLAASGVPS RGLFIIELVV ALLITRIPYL SVPFKWLESY 
FHELSHGIAT ILSSGVVSHI QLFPNGAGFC FSQGGSPMLI GFAGYFGAAC WGYLIYLLAT 
WPKGIRVSFA LLGALVVLSG LLWGRDILTL AILAVLTIIL LLPLKLSQNK MLTQFLRIVG 
LMIMLNALAS PTVLLGLDGQ GDAVMLAERS WIPAWIWVGL WLLTSACALY FAWRRVDNAA 
SR