| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1871 |
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| Symbol | |
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| ID | 5371132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2232566 |
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| End bp | 2233828 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640830074 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001366077 |
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| Protein GI | 153000396 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.911703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTG CTGAATCAGT AGAGGCCCTC GCGCTTTATT TAAATCATCA ACGGATTGCG
ATACTCACCC ATTATTCAGG TGGTAAAAAC ATTCTGAAAT TTGACCCTGA ATATATCGCG
ATGCCAAAAG CACTTCGACC AACATTAACG CTCACCCAAC TGCTAGACCC CCACTACATC
GATAAAATAC AAGTCAGAAC ACAAAGATTA TCACCGGTGC TGTCTAACTT GCTCCCCGAG
GGCGCATTGC GGCATTGGAT GTCAGCCGCG CTAAAAGTAC ATGAGAACAA CGAATTTCCC
ATATTGGCAT GGGCAGGGAG CAATCTTCCC GGCGGCTTAA TCGCATCAGC CATAGCAAAA
GAAGATATTC CAGCTTGGGC ACTATCGCCA CGGGAAAGAA CAGAAGCCAT CGTAATCGAC
ATCACCCACA CCAGTAATAA GTTCTCACTT GCCGGTGTTC AAATGAAATT CTCGACAAGC
AGAAACGATG GACGATTCAA CATAAATGCC AATCAAGAAG CCCAAGATAG TTGGATTATC
AAGACGCCTT CAACAGTACA TCGCAACGTC CCACAAAATG AATACACTGC AATGAAATTG
GCACAAATAA TCGGAGTGAA TATCCCTGAA ATTGAGCTCA TCTCGCTTAA CGCATTGGAT
AATCTACCTA ACATCAAACT CCCAGATGAA CCAACGGCAT ACGCAATTAA ACGCTTTGAC
CGCAGTGATA CAGGCCGCAT TCATGCAGAG GACTTTGCCC AAATATTCGA AGTTTACGCC
CATGATAAAT ACGGTAAATA CAACTACGAA GCCATAGCGA AAGCTCTATA CATGAGCAGC
TACAATGGAC TAAAAGACGT GCAGCAAATG GCAAGGCGAT TGCTGGCCAA TATCTTGCTC
GCCAACGGTG ATGCCCACTT AAAAAATTGG AGTGTTATCT ACCCAGATAA CCAAAATGCG
ATACTCTCAC CCGCTTACGA TATTGTGAGC ACCTTACCCT ACATAGAAGG CGAAACCGCC
ATTGCTCTCA ACATGAATAA ACAAAAACTA TGGTACGCCA TTGATATCAC TACCTTCCAA
GCATGGGCAA CGAGAACAGG CATACCATGG CCCGCGATAA AGGTTCATTT ACTGGATGCC
ATGCAAAAAG CCCGTACTCT TTGGCCAGAG GCACTTGCTG AACTCCCCAT GCATGAAGAG
CATAAAGCGA TATTAAAAGC TCACTGGGCC AAACTACATA ACGACTTTAA AATCCTCTGC
TAG
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| Protein sequence | MKPAESVEAL ALYLNHQRIA ILTHYSGGKN ILKFDPEYIA MPKALRPTLT LTQLLDPHYI
DKIQVRTQRL SPVLSNLLPE GALRHWMSAA LKVHENNEFP ILAWAGSNLP GGLIASAIAK
EDIPAWALSP RERTEAIVID ITHTSNKFSL AGVQMKFSTS RNDGRFNINA NQEAQDSWII
KTPSTVHRNV PQNEYTAMKL AQIIGVNIPE IELISLNALD NLPNIKLPDE PTAYAIKRFD
RSDTGRIHAE DFAQIFEVYA HDKYGKYNYE AIAKALYMSS YNGLKDVQQM ARRLLANILL
ANGDAHLKNW SVIYPDNQNA ILSPAYDIVS TLPYIEGETA IALNMNKQKL WYAIDITTFQ
AWATRTGIPW PAIKVHLLDA MQKARTLWPE ALAELPMHEE HKAILKAHWA KLHNDFKILC
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