Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1839 |
Symbol | |
ID | 5372435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2205577 |
End bp | 2206647 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640830042 |
Product | hypothetical protein |
Protein accession | YP_001366045 |
Protein GI | 153000364 |
COG category | [S] Function unknown |
COG ID | [COG4748] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00358423 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTA TTGAAAGGAT TGATGTTCTC TCTAAACGTA TCCCACAAAT TGCTAGTAGC CTTCAAACCG AAGAAGCGAC AAAGAATGCC TTAATCATGC CCTTCCTGCA TACAGTTTTG GGATATGACG TATTCAATCC CAATGAAGTT GTTCCGGAAT TTACTGCCGA TACTGCCTGT AAGAAAGGTG AAAAAGTAGA TTATGCTTTA ATGAAAGATG GCGAAGTACA AATACTGATA GAATGTAAAA AGTACAACGA AAAACTATCA ATAAAACATG CTGCTCAGCT ATTTCGTTAT TTTTCAGTAA CGAACGCCCG TCTTGCCATT TTGACAAATG GCACTGAGTA TCAGTTCTAT ACCGACCTAG ATGCTCCAAA TAAAATGGAT GAAAAACCAT TTCTTACACT AGATCTGGAA AATATTGACG AGCATTTAAT TCCTGAAGTA AAGAAACTCA CTAAAAGTTC ATTCGATGTA GATTCCATCG TAAGTGCAGC AGGTGAACTT AAGTACTTAA GCCAAATAAA ACGTATCATA AGCGAGCAGT TTAAAGAACC TGAGGACGAA TTCATCCGCT TTTTTGCCTC AAGAGCCTAC GATGGTGTTC TCACACCCAA AGTGAAACAC CAATTCGCAG AGATTACGCA TAAAGCACTA AGACAATTTC TAAGCGACAG TATCAATGAA CGATTAAAAT CTGCTATTGG TGGAGATAAG CCAGTTATTG AAGATAAAAA CTCAAGCGAG TCTTTAATAA TTTCCGATGA CGAAAAAATT AAAGTCATTA CAACAGATGA AGAAATAGAA GGTTTCAATA TTATTAAAGC CATCTTGAGA CAAAAATTAG AAGTAAATAG AATTATTGCG AGAGATACAC AAAGCTACTT TGGTGTGTTA CTAGATGACA ACAATCGTAA GCCTTTATGT CGATTGCACT TTAATGCTAA ACAAAAATAC CTTGGATTAA TGGATGCTAA TAAAAATGAA ACTCGTCATC CCATTAGTTC AGTAGACGAT ATTTTTAGTT ATAGTGAACA ACTACTTACT ACAGTCACTT TTTACGAGTA A
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Protein sequence | MDFIERIDVL SKRIPQIASS LQTEEATKNA LIMPFLHTVL GYDVFNPNEV VPEFTADTAC KKGEKVDYAL MKDGEVQILI ECKKYNEKLS IKHAAQLFRY FSVTNARLAI LTNGTEYQFY TDLDAPNKMD EKPFLTLDLE NIDEHLIPEV KKLTKSSFDV DSIVSAAGEL KYLSQIKRII SEQFKEPEDE FIRFFASRAY DGVLTPKVKH QFAEITHKAL RQFLSDSINE RLKSAIGGDK PVIEDKNSSE SLIISDDEKI KVITTDEEIE GFNIIKAILR QKLEVNRIIA RDTQSYFGVL LDDNNRKPLC RLHFNAKQKY LGLMDANKNE TRHPISSVDD IFSYSEQLLT TVTFYE
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