Gene Shew185_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1839 
Symbol 
ID5372435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2205577 
End bp2206647 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content35% 
IMG OID640830042 
Producthypothetical protein 
Protein accessionYP_001366045 
Protein GI153000364 
COG category[S] Function unknown 
COG ID[COG4748] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00358423 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA TTGAAAGGAT TGATGTTCTC TCTAAACGTA TCCCACAAAT TGCTAGTAGC 
CTTCAAACCG AAGAAGCGAC AAAGAATGCC TTAATCATGC CCTTCCTGCA TACAGTTTTG
GGATATGACG TATTCAATCC CAATGAAGTT GTTCCGGAAT TTACTGCCGA TACTGCCTGT
AAGAAAGGTG AAAAAGTAGA TTATGCTTTA ATGAAAGATG GCGAAGTACA AATACTGATA
GAATGTAAAA AGTACAACGA AAAACTATCA ATAAAACATG CTGCTCAGCT ATTTCGTTAT
TTTTCAGTAA CGAACGCCCG TCTTGCCATT TTGACAAATG GCACTGAGTA TCAGTTCTAT
ACCGACCTAG ATGCTCCAAA TAAAATGGAT GAAAAACCAT TTCTTACACT AGATCTGGAA
AATATTGACG AGCATTTAAT TCCTGAAGTA AAGAAACTCA CTAAAAGTTC ATTCGATGTA
GATTCCATCG TAAGTGCAGC AGGTGAACTT AAGTACTTAA GCCAAATAAA ACGTATCATA
AGCGAGCAGT TTAAAGAACC TGAGGACGAA TTCATCCGCT TTTTTGCCTC AAGAGCCTAC
GATGGTGTTC TCACACCCAA AGTGAAACAC CAATTCGCAG AGATTACGCA TAAAGCACTA
AGACAATTTC TAAGCGACAG TATCAATGAA CGATTAAAAT CTGCTATTGG TGGAGATAAG
CCAGTTATTG AAGATAAAAA CTCAAGCGAG TCTTTAATAA TTTCCGATGA CGAAAAAATT
AAAGTCATTA CAACAGATGA AGAAATAGAA GGTTTCAATA TTATTAAAGC CATCTTGAGA
CAAAAATTAG AAGTAAATAG AATTATTGCG AGAGATACAC AAAGCTACTT TGGTGTGTTA
CTAGATGACA ACAATCGTAA GCCTTTATGT CGATTGCACT TTAATGCTAA ACAAAAATAC
CTTGGATTAA TGGATGCTAA TAAAAATGAA ACTCGTCATC CCATTAGTTC AGTAGACGAT
ATTTTTAGTT ATAGTGAACA ACTACTTACT ACAGTCACTT TTTACGAGTA A
 
Protein sequence
MDFIERIDVL SKRIPQIASS LQTEEATKNA LIMPFLHTVL GYDVFNPNEV VPEFTADTAC 
KKGEKVDYAL MKDGEVQILI ECKKYNEKLS IKHAAQLFRY FSVTNARLAI LTNGTEYQFY
TDLDAPNKMD EKPFLTLDLE NIDEHLIPEV KKLTKSSFDV DSIVSAAGEL KYLSQIKRII
SEQFKEPEDE FIRFFASRAY DGVLTPKVKH QFAEITHKAL RQFLSDSINE RLKSAIGGDK
PVIEDKNSSE SLIISDDEKI KVITTDEEIE GFNIIKAILR QKLEVNRIIA RDTQSYFGVL
LDDNNRKPLC RLHFNAKQKY LGLMDANKNE TRHPISSVDD IFSYSEQLLT TVTFYE