Gene Shew185_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1808 
Symbol 
ID5369515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2167708 
End bp2168862 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content47% 
IMG OID640830011 
Producthypothetical protein 
Protein accessionYP_001366014 
Protein GI153000333 
COG category[S] Function unknown 
COG ID[COG4984] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCAGA TAAAATCTCA AGTGTGTGGC TGGGTTGAAC AGGGACATAT CACGCAAGAG 
CAAGCGAATA CGCTTTATCG GCAGGTCACA GTGTTGCCAG ATGCGTCGAG CTGGCGTGGC
TTAATCGCTA ACTTATTACT CTGGTTTGGC GCCTTGAGCT TTGCCTCTGG GGTGATTTTT
TTCTTTGCCT ACAATTGGCA ATCTCTCGGG CATTTTGCCA AATTTGGCCT TATTGAAGTA
GCGATACTGC TCGCCATCGC CGCATTTGCT TGGCTCTATT ATCGTGCTAA TTCCCTTTCT
ACTGCTTCCC ATTCCCTTCG TCACAGTCAT AGTAACTACA GTAACCAAAG CAACGACAGC
AGATTTGGTG CGACGACAGC CAATGGTGTG TTATTAGCCG CGAGCGTATT GGTGGGCGGT
TTATTAGCAC TGGTTGGACA AACCTATCAA ACGGGCGCCG ATCCTTGGCA GTTATTCGCC
CTGTGGGCGT TAGTGATCTT GCCCTTCGCT TGGGTGGCGG GATTCGATGG TTTATGGCTG
CTGCTGGTGG GACTTATTAA CCTAAGCATA GGGATATTTT TAGATTCCTT TTCCCATTTA
TGGGGCGCCT TCTTGGATGA ACAAGGCCAA CTGCTGATCT TTATCTGTTT GAATTTAGCT
ATCTATTACG CTTTTGTTTT TCTAGACCGC AACGTCGTGG GGCGCTGGCA TGCGCCAATT
CTCGAATATG CGTGTTCACT GTTTGCGATG GGCTGTTTTA CTTGGTTAAT CACTTGGCTG
ATTTTCGATG ATTTCTTTAA AGGTGATGGC TTTAGCACTG GTGTCATCAG TGGTTATCTT
GCCCATCTGG TGTTGGGATT CGTTATTTTT CGCTATCGCT TACCGCGCAT TTATCCCTTA
GCCTTGGGCG GTTTTAGCTT GATTGCCGTG GGCGCTGCGT TACTGGTACG GTTGATGTTT
GAGGACAATG ATCCCATAGG TGGTTTTTTG TTTATTGGGC TTTACATCAT TTTGGCGAGC
ACAGGCTTGA GTATTTGGTT AAAGGAACTC AGTCGCAAGC TAAAACCACT GTCAGAATCT
ATGTCAGAAT TAGAGCCTGA GCCCGCAGCG AGAGCGACCC AAGGGAAAGT GGGAGACATT
CATGAGCAAC AATAA
 
Protein sequence
MSQIKSQVCG WVEQGHITQE QANTLYRQVT VLPDASSWRG LIANLLLWFG ALSFASGVIF 
FFAYNWQSLG HFAKFGLIEV AILLAIAAFA WLYYRANSLS TASHSLRHSH SNYSNQSNDS
RFGATTANGV LLAASVLVGG LLALVGQTYQ TGADPWQLFA LWALVILPFA WVAGFDGLWL
LLVGLINLSI GIFLDSFSHL WGAFLDEQGQ LLIFICLNLA IYYAFVFLDR NVVGRWHAPI
LEYACSLFAM GCFTWLITWL IFDDFFKGDG FSTGVISGYL AHLVLGFVIF RYRLPRIYPL
ALGGFSLIAV GAALLVRLMF EDNDPIGGFL FIGLYIILAS TGLSIWLKEL SRKLKPLSES
MSELEPEPAA RATQGKVGDI HEQQ