Gene Shew185_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1785 
Symbol 
ID5369997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2147698 
End bp2148780 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content46% 
IMG OID640829988 
Producthypothetical protein 
Protein accessionYP_001365991 
Protein GI153000310 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.539102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACTG TTTTTTCTCG TTGGTATCAA GAGCGCTTTA GTGATCCACA AGCGGTGACC 
TTAATGGCTA TCCTTGTTGG GTTCGCGTTA GTGATTTATT TCGCAGCAGG TTTACTTGCC
CCCTTGTTAG TCGCGCTGGT GTTGGCATTT CTATTGGAAT GGCCCGTGGC ACAAATGCTT
AAAGTGGGCA TTAATCGCAC CGCTGGTGCG TCCTTAGTTA TCGTGTTGTT TTTAGGCATT
GTGGTCCTAC TGACATTTGG CTTAATTCCG AGTGTGTGGC GCCAAGGCGT GAGCTTAATT
GCCGATCTGC CGAGCATGAT AGATAAAGGG CTGCTGACGA TACAAACCTT GATCAATCAA
TATCCGCAAT TTATCAATCC AGAGCAGTTA GATCTGATGG TCGGAGAGCT TAAAAAGCTG
CTTGATACTC AGCATGTGCT GGATATTGCT AAGCAATTAA TTGGCTACTC AGCTTCTTTG
CTCGTCTTGA TGGTGTATGC GATTTTAGTC CCTTTGTTGG TGTTTTTCTT TTTAAAGGAC
AAAGATCAAC TGATCAGCGG CAGTAAGCGC TTTTTCCCCG CCAATCGCCA GTTAGCCCGC
AAAGTGTGGT TTGAAATGCA TCAGCAAATT TTCAATTATA TTCGTGGTAA AGTGATTGAA
ATCGTGGTTG TTGGCGTCGC GACCTATATC TTGTTTGCCG TAATGGGACT GAGATATTCA
GTGTTGCTCG GGGTGTTGAC TGGGTTGTCG GTATTGATCC CCTACGTTGG TGCAACCTTA
GTCACCTTGC CGATCACCTT AGTGGCATTT TTTCAGTGGG GTTTTAGTTC TGAATTTGGC
TATTTGATGT TGGGTTACGG CATTATTCAG GCGCTCGACG GTAATTTACT CGTGCCGATT
TTGTTCTCCG ATGCGGTGGA TTTGCATCCG GTGATCATCA TAGCTGCGGT GTTAGTCTTT
GGCGGTTTAT GGGGTGTGTG GGGGGTATTT TTTGCCATTC CATTGGCCTC GTTGGTCAAA
GCCGTGATTA ACGCTTGGCC TAAAACTGAG GTTGAAACTC TCCATGGACT CGATGCGAGT
TGA
 
Protein sequence
MFTVFSRWYQ ERFSDPQAVT LMAILVGFAL VIYFAAGLLA PLLVALVLAF LLEWPVAQML 
KVGINRTAGA SLVIVLFLGI VVLLTFGLIP SVWRQGVSLI ADLPSMIDKG LLTIQTLINQ
YPQFINPEQL DLMVGELKKL LDTQHVLDIA KQLIGYSASL LVLMVYAILV PLLVFFFLKD
KDQLISGSKR FFPANRQLAR KVWFEMHQQI FNYIRGKVIE IVVVGVATYI LFAVMGLRYS
VLLGVLTGLS VLIPYVGATL VTLPITLVAF FQWGFSSEFG YLMLGYGIIQ ALDGNLLVPI
LFSDAVDLHP VIIIAAVLVF GGLWGVWGVF FAIPLASLVK AVINAWPKTE VETLHGLDAS