Gene Shew185_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1738 
Symbol 
ID5371385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp2092493 
End bp2092894 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content47% 
IMG OID640829934 
ProductPol-Pal system-associated acyl-CoA thioesterase 
Protein accessionYP_001365944 
Protein GI153000263 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000000578703 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTTC ATTGGCCTAT TTCAGTCTAT TACGAAGACA CCGACGCTGG CGGCGTTGTC 
TATCATTCGA ACTATCTCAA CTTTTTTGAG CGGGCGAGAA CCGAGTGGCT AAAAGCCCTT 
GGCGTGAGTC AGACTGCGCT TTTAGCCGAC GATACCGCCT TTGTGGTAAA GCGTGCGGAA 
TTAGATTTTC GCAAAGCGGC ACGTTTTGAA CAGAACCTTA TTGTTGAAAC TAAGGTCATA 
GAGTTGAAAA AGGCCTCGTT GATCTTTCAT CAACGCTTGG TCGATAAACA GGGAGACTGT 
TATTGTGAAG GCACAGTGCT GGTTGTTTGT GTTGCGCTGT CACGAATGCG TCCCCGAGCT 
ATTCCCTTAA ATATTGTGCA GGAGTTTGAC AGTGCAAGCT GA
 
Protein sequence
MMFHWPISVY YEDTDAGGVV YHSNYLNFFE RARTEWLKAL GVSQTALLAD DTAFVVKRAE 
LDFRKAARFE QNLIVETKVI ELKKASLIFH QRLVDKQGDC YCEGTVLVVC VALSRMRPRA 
IPLNIVQEFD SAS