| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1714 |
|---|
| Symbol | |
|---|
| ID | 5371308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2061442 |
|---|
| End bp | 2062401 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640829910 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_001365920 |
|---|
| Protein GI | 153000239 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000275042 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACAA AAATTCTCGG AACTGGTAGT TATCTGCCAG TGCAGGTGCG TAGCAATCAA
GATTTGGAAA AAATGGTGGA AACCACTGAC CAATGGATTG TTGAACGTAC AGGTATATCA
GAACGTCGCA TTGCGGCCTT CGATGAAACC GTTTCAACTA TGGGCTACCA AGCGGCACTC
AAAGCGCTGG AAATGGCTGG CATAGAAGCA TCAGATTTAG ACATGATCGT TTGCGGCACC
ACCAGTGCAC CAAATGCTTT TCCAGCTGCG GCCTGTGAAA TCCAAGCCAT GCTTGGCGTG
CATACCATTC CAGCATTCGA CATCGCTGCG GCTTGTTCAG GCTTTGTTTA TGCTTTATCT
GTTGCCGACC AATTTGTTAA AACGGGCGCT GCTAAAAAAG TCTTAGTGAT TGGTGCCGAT
GTGCTGTCTC GCCTATGTGA GCCAGAGGAT CGTTCAACGA TTATTTTATT TGGTGATGGT
GCGGGCGCCG TTGTGATTGG TGCATCTGAA ACGCCAGGGA TCATTTCTAC CCACATTTAT
GCCGATGGTC GCCAAGGCGA CTTATTGAAA TGCGCTTTCC CACCACGCCA AGGCGAAACC
TCTGAAGCGG TCGGTTTTAT GACCATGAAA GGTAACGATG TCTTTAAAGT GGCTGTGACT
CAATTGTCCC ATGTTGTGAC TGAGACGCTG CGCATCAACA ATATCGATAA GTCAGAAATT
GATTGGTTAG TGCCACATCA AGCTAACTTC CGTATTATTA ATGCTACCGC CAAAAAGCTC
GATATGAGTC TCGATAAAGT CGTATTGACC TTAGCTAAAC ACGGTAATAC CTCAGCTGCA
TCTGTGCCCA TCGCATTAGA TGAAGCCGTG CGTGATGGCC GCATTCAGCG TGGACAACTC
CTGCTGCTTG AAGCCTTCGG TGCCGGTTTT GCGTGGGGCA GTGCGCTCAT TCGCTTCTAA
|
|---|
| Protein sequence | MHTKILGTGS YLPVQVRSNQ DLEKMVETTD QWIVERTGIS ERRIAAFDET VSTMGYQAAL
KALEMAGIEA SDLDMIVCGT TSAPNAFPAA ACEIQAMLGV HTIPAFDIAA ACSGFVYALS
VADQFVKTGA AKKVLVIGAD VLSRLCEPED RSTIILFGDG AGAVVIGASE TPGIISTHIY
ADGRQGDLLK CAFPPRQGET SEAVGFMTMK GNDVFKVAVT QLSHVVTETL RINNIDKSEI
DWLVPHQANF RIINATAKKL DMSLDKVVLT LAKHGNTSAA SVPIALDEAV RDGRIQRGQL
LLLEAFGAGF AWGSALIRF
|
|---|
| |