Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1696 |
Symbol | |
ID | 5370940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2041051 |
End bp | 2041479 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640829893 |
Product | hypothetical protein |
Protein accession | YP_001365903 |
Protein GI | 153000222 |
COG category | [S] Function unknown |
COG ID | [COG3236] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02464] conserved hypothetical protein, ribA/ribD-fused |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0575621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGATCT TTTTCTATAC AAAGACAGAT GAGTTTGGAG AGTTTAGTAA CTTCTCAAAG TTCGGTGTTG AGATGGACGG GGTTTGGTGG CCCACAGTGG AACACTACTT TCAGGCTCAA AAATTTGAGA GTAAAGAGCA TCAAGAAAGA ATCAGAACAG CCCATACCCC CAAAATTGCT GCTGAACTTG GCAGGAGCCG GAAAGTAGCC ATAAGAACTG ATTGGGAAAA AGTTAAGGAC AACATTATGT ATGAAGCAGT CCTGAAAAAG TTCAAAACCC ATCCTGAGTT AGCAGCATTA CTTAAGTCCA CAGGAACCCA ATACATAGTT GAGAATGCTC CAGGTGACTA TTATTGGGGT TGTGGTCAAG ATGGGACTGG CCAAAATAAA CTAGGAAAAA TTTTGGTTAA GGTTCGCGAC GAAATATGA
|
Protein sequence | MTIFFYTKTD EFGEFSNFSK FGVEMDGVWW PTVEHYFQAQ KFESKEHQER IRTAHTPKIA AELGRSRKVA IRTDWEKVKD NIMYEAVLKK FKTHPELAAL LKSTGTQYIV ENAPGDYYWG CGQDGTGQNK LGKILVKVRD EI
|
| |