Gene Shew185_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1696 
Symbol 
ID5370940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2041051 
End bp2041479 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content41% 
IMG OID640829893 
Producthypothetical protein 
Protein accessionYP_001365903 
Protein GI153000222 
COG category[S] Function unknown 
COG ID[COG3236] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02464] conserved hypothetical protein, ribA/ribD-fused 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0575621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCT TTTTCTATAC AAAGACAGAT GAGTTTGGAG AGTTTAGTAA CTTCTCAAAG 
TTCGGTGTTG AGATGGACGG GGTTTGGTGG CCCACAGTGG AACACTACTT TCAGGCTCAA
AAATTTGAGA GTAAAGAGCA TCAAGAAAGA ATCAGAACAG CCCATACCCC CAAAATTGCT
GCTGAACTTG GCAGGAGCCG GAAAGTAGCC ATAAGAACTG ATTGGGAAAA AGTTAAGGAC
AACATTATGT ATGAAGCAGT CCTGAAAAAG TTCAAAACCC ATCCTGAGTT AGCAGCATTA
CTTAAGTCCA CAGGAACCCA ATACATAGTT GAGAATGCTC CAGGTGACTA TTATTGGGGT
TGTGGTCAAG ATGGGACTGG CCAAAATAAA CTAGGAAAAA TTTTGGTTAA GGTTCGCGAC
GAAATATGA
 
Protein sequence
MTIFFYTKTD EFGEFSNFSK FGVEMDGVWW PTVEHYFQAQ KFESKEHQER IRTAHTPKIA 
AELGRSRKVA IRTDWEKVKD NIMYEAVLKK FKTHPELAAL LKSTGTQYIV ENAPGDYYWG
CGQDGTGQNK LGKILVKVRD EI