Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1628 |
Symbol | |
ID | 5370141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1975181 |
End bp | 1975585 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640829826 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_001365836 |
Protein GI | 153000155 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.426629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTA AAAAGCATTC CAGTATAGAT GAGGAAGCGC AAATTGATAT GACACCGATG CTCGACATCG TGTTCATCAT GCTAATCTTC TTCATTGTAA CAACGTCATT CGTGAAACCA TCTGGTTTGG ACTATAACAA ACCAAAAGCT TCACAAGCGA CTTCAAAGCC TTCGGCGAAC ATCTTTATCG GCGTCAGCAA AACGGGCGTG ATCATGATGG AAAACCGTCA GGTTGATATC GAACGTGTAA CAGCAAACGT TGAACGTATG CTGGCTGAAG CTCCTGAAGC TGCTGTATTG ATTCAGGCTG ATAAAGACGC AATGCACGGC TTAGTTGTTA AAGTTCTAGA CCAAGTGAAA GCGGCTGGTA TAGATAAAAT TTCGGTATCT GCGGGGAACG ATTAA
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Protein sequence | MARKKHSSID EEAQIDMTPM LDIVFIMLIF FIVTTSFVKP SGLDYNKPKA SQATSKPSAN IFIGVSKTGV IMMENRQVDI ERVTANVERM LAEAPEAAVL IQADKDAMHG LVVKVLDQVK AAGIDKISVS AGND
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