Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1617 |
Symbol | |
ID | 5371365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1955363 |
End bp | 1956136 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829817 |
Product | hypothetical protein |
Protein accession | YP_001365827 |
Protein GI | 153000146 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.449373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAATTGT TACTCGAGCC CAGTCATTGG GCCCTGTTGG CAGTTATAGG TCTTATCGCT GGATTCATCG ATGCCGTCGT TGGCGGCGGT GGTCTATTGT CGATCCCCGC GCTGTTAACC TTAGGCATTG CACCGCACAC CGTATTAGGT ACCAATAAGT TAGCCGCCAG TTTTGGCTCT TCAATGGCGG CTTGGACCTA TTATCGCCAG CACCTTTTTA AACCCTCATT TTGGTACATG GCCTTTATTG CCACCTTTAT TGGCGCCGTA TTGGGCAGTT TCTTAGTCTA TTTAGTCGAT ACCCAATGGC TCGAAAAAGT CCTGCCGTTG CTGATCATTG GCATTGCCAT TTACAGTTTA GTCAGCCCCA ATGCGATATC GGACGTTAAC TGCCAAGCCC CAACCAGCAA ACCACCCGCC AAGCAACAAT GGCTACAGGG ACTTGCTTTA GGCACTTATG ATGGCTTTGC AGGCCCTGGC ATTGGCGCGT TTTGGACTGT CACATCCGGC TCTTTGTATA AACTGCCTTT ACTACACAGC TGCGGCCTCG CCCGTGCGAT GACCTTCACC AGCAACTTGA CCGCATTGAC TATCTTTGGC TGGCTTGGGC AGGTAGAGTG GCAAATAGGT TTGTGGATGG GATTGTGCAT GATGTTAGGC TCATTTATCG GCGCGCGCTG CGCGATTAAA TTTGGCATGC CCTTTATTCG TCCACTGTTT ATTTTGATCG TGCTAATGAT TGCAGCAAAT TTGGCATGGA GCGCATGGTT GTGA
|
Protein sequence | MELLLEPSHW ALLAVIGLIA GFIDAVVGGG GLLSIPALLT LGIAPHTVLG TNKLAASFGS SMAAWTYYRQ HLFKPSFWYM AFIATFIGAV LGSFLVYLVD TQWLEKVLPL LIIGIAIYSL VSPNAISDVN CQAPTSKPPA KQQWLQGLAL GTYDGFAGPG IGAFWTVTSG SLYKLPLLHS CGLARAMTFT SNLTALTIFG WLGQVEWQIG LWMGLCMMLG SFIGARCAIK FGMPFIRPLF ILIVLMIAAN LAWSAWL
|
| |