Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1589 |
Symbol | |
ID | 5369632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1924820 |
End bp | 1925314 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640829785 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_001365799 |
Protein GI | 153000118 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000617175 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCACAA TACACACCAA TTTGGGCGAC ATTAAACTGC AACTGAACGC TGAAAAAGCG CCATTAACAG TAGCAAACTT TATGAAATAT GTTGACGAAG GTTTCTTCGA CGGCACTATC TTCCACCGTG TGATTGACGG TTTCATGATC CAAGGTGGTG GCTTCAACGA AGACATGAGC CAAAAGCGTT GTAACGAGCC AGTGAAAAAC GAAGCCAATA ACGGTTTATC AAACCGTACT GGTACTGTCG CTATGGCACG TACTTCTGAT CCACATTCAG CCACTGCACA GTTCTTCATT AACGTGAACG ACAACACTTT CCTCGATTTC AAATCAGAAA CCTCACAGGG CTGGGGCTAC TGCGTATTCG GCGAAATCGT TGAAGGCATG GATATTATCG AAAAAATCAA AGCTGTTAGC ACTGGCAACC GTGGCATGCA TCAAGATGTG CCATTAGAAG CCATTGTGAT TGAAAAAGTC AGCGTTGCGG CATAA
|
Protein sequence | MITIHTNLGD IKLQLNAEKA PLTVANFMKY VDEGFFDGTI FHRVIDGFMI QGGGFNEDMS QKRCNEPVKN EANNGLSNRT GTVAMARTSD PHSATAQFFI NVNDNTFLDF KSETSQGWGY CVFGEIVEGM DIIEKIKAVS TGNRGMHQDV PLEAIVIEKV SVAA
|
| |