| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1584 |
|---|
| Symbol | |
|---|
| ID | 5373513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1917935 |
|---|
| End bp | 1920229 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640829780 |
|---|
| Product | ferrous iron transport protein B |
|---|
| Protein accession | YP_001365794 |
|---|
| Protein GI | 153000113 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000129381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGC AGTTTCATTG CGTCACAGTC GGTAACCCGA ATGCGGGTAA ATCGACGCTC
TTTAACGCGC TAACCGGCGC GAATCAACAA GTCGGTAACT GGTCTGGTGT GACGGTCGAG
AAAAAGACTG GTCATTTCAC CTTAAACGGT GCCGATGTCT ATCTGACCGA TTTACCCGGT
ATTTACGATC TTCTGCCTGC GGGCAATAGT TGCGATTGTT CACTCGATGA GCAAATTGCG
CAGCAATATC TCGCCGAGCA ACGCGTCGAT GGCATTATCA ATTTAGTCGA TGCCACTAAC
ATCGAACGTC ACTTATACCT CACTGCCCAA TTGCGTGAAC TCGCGATCCC TATGGTGGTG
GTGTTGAACA AAATCGATTC TGCAGTCAAA CGCGGTATCA AAGTCGATTT AAAGAAAATG
AGCAAAGAGC TGGGCTGCCC CGTGATTGGT GTGTGCTCTC GCGATCCTGC CGATGTGGAA
AAAGTGCAAG CGCAGGTACT CGATTTACTG CAAGGCCGAG TCTCTGAAGC GCCATTGATG
CTGCATTATG ATGAACAAAT TGAAGCGGGC GTGCAGTTAC TTTGCAGCAA AGACGCGCAA
TTAAGCCGTG GCCGCGCCTT GGCTATGTTA GGCAATGGTT CAGGTTGTGG CAGCTGTCAG
AATGCTGAGC TGCAGGATGA AGTGAATACC TGTACCCAGA TTATCTCTTC GCAAGGCCAT
GATATTGAAG TGATGGTGGC TACCACGCGC TTTAATTTCG TTGAGAAAGT GTTTCAAGGT
TCAGTGAAAG AGTCGGGATT TCTCACCCTC AGTGACAAAT TAGATAAACT CGTATTGCAT
CCGGTGCTTG GCATTCCTGT GTTCTTGTTT GTGATGTATT TGATGTTTAT GTTCAGCATC
AACATTGGCA GTGCTTTTAT CGATTTCTTC GATGTCTTTG CGGGTGCGTT GTTTGTCGAC
CACTTTGGTG CATTCTTGAC GAACATGGGA TCTCCAACTT GGTTAGTCAC TATCTTAGCG
GGTGGGGTTG GCCAAGGTAT TCAAACTGTT ACTACTTTTA TTCCGGTGAT CGCTGCTTTA
TTTCTTGGTT TGTCAGTCCT TGAAAGCTCT GGCTATATGG CGCGCGCCGC ATTTGTGGTC
GATGGTTTAA TGCGCCGCAT CGGTCTGCCC GGTAAAGCTT TCGTACCTAT GATTGTTGGC
TTTGGTTGTT CTGTGCCGGC GATTATGGCG ACGCGGACCT TAGGCAGTGA ACGTGAGCGT
ATTGTCACGG GTATGATGGC GCCATTTATG TCTTGCGGTG CACGTCTGCC TGTGTATGCG
TTATTTGCCG CGGCTTTCTT CCCCGATTCT GGGCAGAATT TAGTCTTCTT GCTTTACGTT
ATTGGTATCT TTGCCGCTAT CGGAACGGGT TTATTACTCA GAAGCACCCT GTTGCCCGGC
ACCAGCAGCG CTGTGGTGAT GGAATTGCCA AGCTATGAGA TGCCAAAGCT CAAAGCCGTT
ATGGTACGTA CTGGTAAACG CACTAAGAGC TTTATTTTAG GTGCGGGTAA AACCATTGTG
CTGGTGGTGA CGTTACTAAA CTTTATCAAT GCCATTGGTG TTGATGGCAC TTTCGGCCAT
GAAGACAGCC AAGCATCTTT GCTGAGTGTC GCGAGCCAAA AAATCACGCC AATCTTCTCG
CCTATGGGCA TAGAGCAGGA TAACTGGCCA GCAACGGTCG GAATTATCAC AGGTATTTTT
GCTAAAGAAG CGGTTGTTGG TACCTTAAAC AGTTTGTACA GCACTGCTGC GCCCGCTGAT
GAAGAGCTGA CACCTTTGAG TGAAAGCTTT AATGCAGCTC TGGCGACGAT TCCTGCAAAC
TTGTTTGGAA TTGATCTGGA AGATCCGCTG AAGTTGTCGG TTGGTGATTT GACTAATAAA
GAAGCGATAG CGGAAGAGCA AGGCGTCGCG ACATCGACCT TCGGTGCCCT GCAAGCCGGT
TTCAGTGGTA AAATTGCGGC GTTCTCTTAC TTGCTGTTTA TCTTGCTGTA TACCCCTTGT
GTTGCGGCGA TGGGCGCTTT AGTGCATGAG TTTGGTTCCC GTTGGGCGAC ATTTGCAGCA
ACGTGGACTT TCTCTCTGGC CTATGGCTCA GCGACGGTAG TCTATCAAGC GGCAACTTTT
ACGCAGCATC CTGTGCAATC GAGTCTGTGG ATCGGTTTCT TCCTGTTTGC GTTAGTGGCC
TTTTATCAAT GGCTGAAACG TAAGGGCAGA AGAACCCAGC AGATCATTCC GGGGATCCGC
ATCATTACCG AGTAA
|
|---|
| Protein sequence | MTKQFHCVTV GNPNAGKSTL FNALTGANQQ VGNWSGVTVE KKTGHFTLNG ADVYLTDLPG
IYDLLPAGNS CDCSLDEQIA QQYLAEQRVD GIINLVDATN IERHLYLTAQ LRELAIPMVV
VLNKIDSAVK RGIKVDLKKM SKELGCPVIG VCSRDPADVE KVQAQVLDLL QGRVSEAPLM
LHYDEQIEAG VQLLCSKDAQ LSRGRALAML GNGSGCGSCQ NAELQDEVNT CTQIISSQGH
DIEVMVATTR FNFVEKVFQG SVKESGFLTL SDKLDKLVLH PVLGIPVFLF VMYLMFMFSI
NIGSAFIDFF DVFAGALFVD HFGAFLTNMG SPTWLVTILA GGVGQGIQTV TTFIPVIAAL
FLGLSVLESS GYMARAAFVV DGLMRRIGLP GKAFVPMIVG FGCSVPAIMA TRTLGSERER
IVTGMMAPFM SCGARLPVYA LFAAAFFPDS GQNLVFLLYV IGIFAAIGTG LLLRSTLLPG
TSSAVVMELP SYEMPKLKAV MVRTGKRTKS FILGAGKTIV LVVTLLNFIN AIGVDGTFGH
EDSQASLLSV ASQKITPIFS PMGIEQDNWP ATVGIITGIF AKEAVVGTLN SLYSTAAPAD
EELTPLSESF NAALATIPAN LFGIDLEDPL KLSVGDLTNK EAIAEEQGVA TSTFGALQAG
FSGKIAAFSY LLFILLYTPC VAAMGALVHE FGSRWATFAA TWTFSLAYGS ATVVYQAATF
TQHPVQSSLW IGFFLFALVA FYQWLKRKGR RTQQIIPGIR IITE
|
|---|
| |