| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1569 |
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| Symbol | |
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| ID | 5370622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1895339 |
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| End bp | 1896988 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829765 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001365779 |
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| Protein GI | 153000098 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAGA AACTCCCTCG CCAAGCCACA GCATCCGAAT CAAGTCTGCT GCGCATTTTT
ACTGCACCGG AAGATGCAAG CTCAACGCTG AGTATTATCG AGCAAAAGCT CTCCGAGGAT
TTAGCAGGCT TTTTGGGTGA CAGTATCGCC GCGCTCGAAA AACCCTTGTC GGAAATTGAA
ACCGATTTTC AAGCCTTTGA GATCCCACTT CAGCCGCGTT TCGTCTCCGA TTACACCGAC
GAGATTATGC AAAATTTGGT GGCGCATTCG GTACACACAG CGGCACCGAG TTTTATCGGC
CACATGACAT CGGCACTGCC CTACTTTGTG TTGCCGCTGT CAAAAATGAT GGTGGGACTC
AATCAAAATC TGGTCAAAAT CGAAACTTCC AAGGCATTTA CGCCGCTTGA GCGCCAAGTG
CTCGGCATGA TGCACCATTT GATTTACGCC CAAGATACGG ATTTTTATCA AAGCTGGATG
CACAGTGCCA ATCATTCCCT CGGCGCATTT TGCTCCGGCG GCACGGTTGC TAACATCACC
GCACTGTGGA TTGCCCGCAA TCAATTATTG AAGGCCGATG GTGAGTTTAA AGGTGTCAGC
CGCGAAGGAT TACTCAAGGC ACTGCGCCAC TATGGCTATG ACGATTTAGC GATTTTAGTC
TCGGAGCGCG GTCACTATTC GCTGGGCAAA GCCGTCGATC TGCTTGGTAT CGGCCGCGAC
AATATCATCA GCATTCCCAC GGGCAGCGAT AACAAGGTCG ATGTCACGAA AATGCGCCAA
GCCGCCCTTG AACTTGCTCG TAAAAACATC AAAGTGTTGG CGATTGTTGG TGTGGCTGGC
ACCACAGAAA CCGGTAATGT TGACCCACTG ACAGAATTAG CGGCGCTGGC AAAAGAGTTA
AATTGTCATT TCCATGTCGA TGCAGCGTGG GGCGGCGCGA GTTTATTATC CAATAAATAC
CGCCACTTAC TCGCAGGTAT CGAACTTGCC GATTCAGTCA CTATCGATGC CCACAAGCAA
ATGTACGTGC CTATGGGCGC AGGCATGGTG TTATTTAAAG ACCCAGAGTT TGCCCACGCC
ATTGCCCATC ACGCCGAATA CATTCTGCGC CGTGGTTCAA AGGATCTCGG CAGCCAAACG
CTGGAAGGTT CACGCCCCGG CATGGCGATG TTAGTGCACG CTTGCTTACA GATCATCGGC
CGCGATGGTT ATGAAATATT AATCAATAAC AGCCTTGAAA AAGCCCGCTA TTTTGCCGAA
CAAATCAAAG CCCATGAGGA TTTTGAGCTA ATCACTGAGC CAGAACTGTG TCTGCTGACT
TACCGTTATG TGCCCGCCAG CATCCAAGCC GCCATGCAAC TTGCCTGTGA GCAAGCAGAC
ACGATAAGAA TCGCCCGCTT TAACGAGCTG CTCGATGGCC TCACTCAGTT TATTCAAAAG
CACCAACGCG AACAGGGTAA ATCCTTCGTC TCCCGCACCC GCATTCAGCC AGCCCGCTAT
TTTAGACAAG CAACCGTAGT GTTTCGCGTA GTACTCGCCA ACCCCCTCAC CAGCCATGAC
ATTCTCAATC AAGTGCTAAT CGAACAAAGT GAAATCGCCG CACTAGATAA CGAGTTCTTA
CCTGCACTTA TGGCGATGGT GGCTGAATAG
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| Protein sequence | MTQKLPRQAT ASESSLLRIF TAPEDASSTL SIIEQKLSED LAGFLGDSIA ALEKPLSEIE
TDFQAFEIPL QPRFVSDYTD EIMQNLVAHS VHTAAPSFIG HMTSALPYFV LPLSKMMVGL
NQNLVKIETS KAFTPLERQV LGMMHHLIYA QDTDFYQSWM HSANHSLGAF CSGGTVANIT
ALWIARNQLL KADGEFKGVS REGLLKALRH YGYDDLAILV SERGHYSLGK AVDLLGIGRD
NIISIPTGSD NKVDVTKMRQ AALELARKNI KVLAIVGVAG TTETGNVDPL TELAALAKEL
NCHFHVDAAW GGASLLSNKY RHLLAGIELA DSVTIDAHKQ MYVPMGAGMV LFKDPEFAHA
IAHHAEYILR RGSKDLGSQT LEGSRPGMAM LVHACLQIIG RDGYEILINN SLEKARYFAE
QIKAHEDFEL ITEPELCLLT YRYVPASIQA AMQLACEQAD TIRIARFNEL LDGLTQFIQK
HQREQGKSFV SRTRIQPARY FRQATVVFRV VLANPLTSHD ILNQVLIEQS EIAALDNEFL
PALMAMVAE
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