| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1558 |
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| Symbol | |
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| ID | 5371976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1883916 |
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| End bp | 1884629 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829754 |
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| Product | helix-turn-helix type 11 domain-containing protein |
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| Protein accession | YP_001365768 |
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| Protein GI | 153000087 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCG CCGACCGCCT ATTTCAAATA GTGCAAATTC TTAAACATAA ACGCCTGACC
ACAGCCCAAG AATTGGCTGA ACGGTTAGAG GTGTCCACGC GCACGATTTA CCGTGACGTG
CAGGATTTGT GTTTAAGTGG CATTCCCATT GAAGGGGAGG CGGGTGTCGG CTATTTGTTG
CGCCATGAGG TCAATGTTCC GCCCTTGATG TTTAACGAAG CCGAACTCGA AGCGATTCAA
GTTGGCATGC GTATGGTGCA AACTTGGGGT GGTAAGGAGC TTGGTAGCGC CGCGAGACAG
GCGATGATCA AAGTCGAAGC CGTATTGCCA AAACGATTAC AAGCCTATCA ATCTTTGATG
TTTTCACCGG ATTTTTATCT CGACTCCAAT GAGTTCCAAT TCCTCGATCC GCTGCGTAAT
TCAGCTCAGC GCCGCGAATA CGTCAAACTC TTCTATCAAG ACGTCAAACT CGATGTCACC
GAGCGTGAAG TGCGCCCGCT CGCCATCTAT TTTTGGCGTG GCACTTGGAC CTTACTGACT
TGGTGTGAGC TGCGTTCGGC TTTTCGTAAT TTCAGGGTTG ATCGCATCAC AGGCCTTGTG
CGGTTGAACC GTCATTTTGA ACAAGCACCT GGTCAAGAGC TGGAAGATTA TATTTGCCTG
ATGGATGAAC ATGCGAAGGC GCGAGCCGAA GCAAAAGAAA AGCCACTCGA ATGA
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| Protein sequence | MRRADRLFQI VQILKHKRLT TAQELAERLE VSTRTIYRDV QDLCLSGIPI EGEAGVGYLL
RHEVNVPPLM FNEAELEAIQ VGMRMVQTWG GKELGSAARQ AMIKVEAVLP KRLQAYQSLM
FSPDFYLDSN EFQFLDPLRN SAQRREYVKL FYQDVKLDVT EREVRPLAIY FWRGTWTLLT
WCELRSAFRN FRVDRITGLV RLNRHFEQAP GQELEDYICL MDEHAKARAE AKEKPLE
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