Gene Shew185_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1553 
Symbol 
ID5373773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1878018 
End bp1879004 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content45% 
IMG OID640829749 
Productintegral membrane protein TerC 
Protein accessionYP_001365763 
Protein GI153000082 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.729834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTT TTACCACCCT ATTTGTGGGT TACCCGCTTT GGGTTTGGTT GATGTTTTTC 
GGTTTTGTGC TGGCATTATT GGCCTTCGAT CTTGGCGTAT TACACAAGGA GCAGCATGAA
ATTACTGTGG CCGAAAGTTT AAAACTTTCA GCTTTTTATA TCTGTATGGG TTTACTGTTT
GGGGCTTGGC TGTGGTGGTA CAAGGGCTCA ACGGCGGGTA TGGAATATCT GACGGGTTAT
TTGATTGAAA AATCGCTGTC TATGGATAAC GTCTTTGTTA TCGCCTTAAT CTTCAGTAGT
TTAGGCATCC CACGTTTATA CCAACACAGA GTGCTCTTCT GGGGTATTTT GGGTGTAATA
GTGCTACGCG CAATTATGAT TGGCCTTGGC GCAGTGCTCG TTGCCCAATA TCAAGGCGTA
CTTGTGTTAT TTGGACTCTT CTTGATTTTC ACTGGCGTGA AAATGCTCTT CTCCAATGAC
GAGCATAGTG ATATCCAAGA TAATAAGTTT TACAAATGGT TACGCACTAA GATGCGTTTT
ACGCCGACAC TGCATCAGGA AAAATTCTGG GTACGGGGTG AAGATCATCA GTTATCAAAA
GGATGGTGGG CGACGCCGTT ATTTTTAGCG TTGATCTTAG TGGAAACCGC AGATTTAGTG
TTTGCTGTCG ACAGTATTCC AGCCATTTTT GCGATTACCC AAGATCCTTT CATCGTTTAT
ACCTCGAATA TCTTCGCGAT TTTGGGGCTA CGTGCCTTGT ATTTTGCCTT AGCGGCTATG
GTGCATCGTT TCGAGTACCT TAAATACGCG CTGTCGGTGG TATTAGTGTT TATCGGGGTG
AAAGTGGGCT TAGTGTATTT CAATCACGAG GGCATAGTGG ACTTTACTAT TCCAACCGCA
CTGTCTCTTG GGGTGACGTT CGGCCTGTTA GTCGCAGGGG TCTTGTTCTC GCTGTGGAAA
ACGCGCGGCC AAGAAATCGA TAAATAG
 
Protein sequence
MEFFTTLFVG YPLWVWLMFF GFVLALLAFD LGVLHKEQHE ITVAESLKLS AFYICMGLLF 
GAWLWWYKGS TAGMEYLTGY LIEKSLSMDN VFVIALIFSS LGIPRLYQHR VLFWGILGVI
VLRAIMIGLG AVLVAQYQGV LVLFGLFLIF TGVKMLFSND EHSDIQDNKF YKWLRTKMRF
TPTLHQEKFW VRGEDHQLSK GWWATPLFLA LILVETADLV FAVDSIPAIF AITQDPFIVY
TSNIFAILGL RALYFALAAM VHRFEYLKYA LSVVLVFIGV KVGLVYFNHE GIVDFTIPTA
LSLGVTFGLL VAGVLFSLWK TRGQEIDK