Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1553 |
Symbol | |
ID | 5373773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1878018 |
End bp | 1879004 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640829749 |
Product | integral membrane protein TerC |
Protein accession | YP_001365763 |
Protein GI | 153000082 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.729834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTTT TTACCACCCT ATTTGTGGGT TACCCGCTTT GGGTTTGGTT GATGTTTTTC GGTTTTGTGC TGGCATTATT GGCCTTCGAT CTTGGCGTAT TACACAAGGA GCAGCATGAA ATTACTGTGG CCGAAAGTTT AAAACTTTCA GCTTTTTATA TCTGTATGGG TTTACTGTTT GGGGCTTGGC TGTGGTGGTA CAAGGGCTCA ACGGCGGGTA TGGAATATCT GACGGGTTAT TTGATTGAAA AATCGCTGTC TATGGATAAC GTCTTTGTTA TCGCCTTAAT CTTCAGTAGT TTAGGCATCC CACGTTTATA CCAACACAGA GTGCTCTTCT GGGGTATTTT GGGTGTAATA GTGCTACGCG CAATTATGAT TGGCCTTGGC GCAGTGCTCG TTGCCCAATA TCAAGGCGTA CTTGTGTTAT TTGGACTCTT CTTGATTTTC ACTGGCGTGA AAATGCTCTT CTCCAATGAC GAGCATAGTG ATATCCAAGA TAATAAGTTT TACAAATGGT TACGCACTAA GATGCGTTTT ACGCCGACAC TGCATCAGGA AAAATTCTGG GTACGGGGTG AAGATCATCA GTTATCAAAA GGATGGTGGG CGACGCCGTT ATTTTTAGCG TTGATCTTAG TGGAAACCGC AGATTTAGTG TTTGCTGTCG ACAGTATTCC AGCCATTTTT GCGATTACCC AAGATCCTTT CATCGTTTAT ACCTCGAATA TCTTCGCGAT TTTGGGGCTA CGTGCCTTGT ATTTTGCCTT AGCGGCTATG GTGCATCGTT TCGAGTACCT TAAATACGCG CTGTCGGTGG TATTAGTGTT TATCGGGGTG AAAGTGGGCT TAGTGTATTT CAATCACGAG GGCATAGTGG ACTTTACTAT TCCAACCGCA CTGTCTCTTG GGGTGACGTT CGGCCTGTTA GTCGCAGGGG TCTTGTTCTC GCTGTGGAAA ACGCGCGGCC AAGAAATCGA TAAATAG
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Protein sequence | MEFFTTLFVG YPLWVWLMFF GFVLALLAFD LGVLHKEQHE ITVAESLKLS AFYICMGLLF GAWLWWYKGS TAGMEYLTGY LIEKSLSMDN VFVIALIFSS LGIPRLYQHR VLFWGILGVI VLRAIMIGLG AVLVAQYQGV LVLFGLFLIF TGVKMLFSND EHSDIQDNKF YKWLRTKMRF TPTLHQEKFW VRGEDHQLSK GWWATPLFLA LILVETADLV FAVDSIPAIF AITQDPFIVY TSNIFAILGL RALYFALAAM VHRFEYLKYA LSVVLVFIGV KVGLVYFNHE GIVDFTIPTA LSLGVTFGLL VAGVLFSLWK TRGQEIDK
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