Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1525 |
Symbol | |
ID | 5369543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1845312 |
End bp | 1846340 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640829722 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_001365736 |
Protein GI | 153000055 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.554146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTA AAGTTATTGG TATCGATTTA GCCAAAAATG TTTTTCAAGT TTGTGTTTGT CTTATGGATA ACTCAGTCAT GAGTAACAAA AAGGTTAACA GAAACAAGCT GCTCGATAAA ATTAGACAAT TCCCCGAAGG TAGTCTTATT GCTATGGAGG CCTGTGGAAC AGCGCATTAC TGGGGAAGAC AATTTCAAGC ACTTGGTTAT CAAGTACAAC TGATCCCTGC TCAACATGTT AAGCCATTTG TTGCAAACCA AAAGAATGAT GCCAACGATG CACTCGCGAT ATGCGAAGCT GCTTTCAGAC CTAATATCCA TATGGTTCCA GTTAAAACTG TTGAGCAGCA AGACATAAAA GCATTACGTT GTGTACGTAG TCGTCTAGTT CAAAATCGAA CCGCCATGGT CAATCAAATT CGAAGCCTAG CGAGCGAGTC TGGTGTGATC TTCTCTGTCG GCAGATTGCA ATTACAAGCG TCACTTAGCC GTATTTTAGC AGATAATGAG CATGAACTGT CTCATACGCT TCATCACCTG TTAAAATTTT TGTATGAAGA TTTATGTGTT TTAAATGAGA AAATTAATCA AATCGAGCGC GACATTAAAG CACTATGTCA AATCCAACCT CGCTACAATG CATTGCTGTC GATCCCTGGC TTTGGACCAT TAGTCACGGC AAGCTTTATG AGTGAATTAG GTTCGGGTCA TCAATTTAAA AATGGCCGGC AATTATCTGC ATGGTGTGGC TTAGTGCCAT CACAGTCGAG TTCCGGTGGA AAAGTTCGAC TAGGATCGAT CACGAAAAAT GGCAGCTCAG AACTACGCGT TTTACTCATC CATGGTGCCA GAGCCGTTGG CCGATTTGCG AGCAAACGTG ATGATAGACT TGGACGATGG TTTAATGCGC TTGCGTTAAG GCAAGGTCGA CACAAAGCCG TTGTCGCATT GGCTAATAAA ATAGTGCGTA TAGGATGGCG GATCCTCACG AGTAACGATA ATTTCGACGT TAATAAAGCG TTTGCGTAA
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Protein sequence | MDIKVIGIDL AKNVFQVCVC LMDNSVMSNK KVNRNKLLDK IRQFPEGSLI AMEACGTAHY WGRQFQALGY QVQLIPAQHV KPFVANQKND ANDALAICEA AFRPNIHMVP VKTVEQQDIK ALRCVRSRLV QNRTAMVNQI RSLASESGVI FSVGRLQLQA SLSRILADNE HELSHTLHHL LKFLYEDLCV LNEKINQIER DIKALCQIQP RYNALLSIPG FGPLVTASFM SELGSGHQFK NGRQLSAWCG LVPSQSSSGG KVRLGSITKN GSSELRVLLI HGARAVGRFA SKRDDRLGRW FNALALRQGR HKAVVALANK IVRIGWRILT SNDNFDVNKA FA
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