| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1513 |
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| Symbol | |
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| ID | 5372895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1829577 |
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| End bp | 1830731 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640829710 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001365724 |
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| Protein GI | 153000043 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCAA CGAAAGGTTT AACGATGTTG AATGACCAAG ATTTTAGTCG CAATCGTTTC
AGTAAAAACA ACTCAAGTAA CAAAAGTTTA AGTAACAGCA GTTTAAGTAG CAGCAAGTTA
AGCAACAGCA AGTTAAGCAA TAATAAGTTA ACTAATCAAA CCGCGTTAAT TAAAAGAGTC
GCGACAGGTG TCGTTTTAGG CTGTTTGTTG CTGCCGTTAG CGGCTTGCAC TCAAGAGTCG
CCGAGCGTCC TTGGCACAGT CGAGCGTGAC AGGCTGACAC TGATCGCGCC CGTGGGTGAG
TTGATTACTC AGGTAAATGT GGTTGAAGGT CAGCAGGTTA AGGCGGGCGA AGTGCTACTC
ACACTCGATT CGACTTCGGC CAATGCGCGC CTTGCCCTGC GTCAAGCCGA GCTTGAACAG
GCCAAGGCTA AACTTTCTGA GGCGGTGACT GGTGCGCGTT TAGAAGATAT CGAACGCGCC
AAGGCCGTGC TCGACGGGGC AAATGCCAGC GTGAAGGAAG CGCAGCGTGC CTTTGAGCGC
ACTAACCGTT TGTATGCCAC CAAAGTGCTG AGCCAAGCGG ATTTAGATAC CGCCCGTGCG
GCGCGAGATA CCAGCTTAGC CAAGCAAGCC GAGGCCGAGC AAAGCCTGCG CCTACTAGAA
AATGGCACCC GTAGTGAGCA GCTAGAACAA GCCAAAGCCG CGGTGGCCGC CGCCAGCGCC
AGTGTCGCCA TCGAACAAAA AGCCTTAGCC GACTTAAGCT TAGTGGCAGC GCGTGATGCC
GTTGTCGATA CCCTACCTTG GCGAGTCGGC GATCGCATTG CTGCGGGTAC TCAGTTGATT
GGTTTGTTGG CGAGTGAGGA TCCCTATGTG CGGGTTTATC TGCCCGCGAC TTGGTTAGAC
AGAGTGAAGG CGGGTGATAA GGTCAATATT CGAGTGGATG GCCGCGAAAT ACCGATTGCT
GGCACAGTGC GCAATATCCG CAGTCAACCC GCTTACACGC CGTTTTATGC GCTTAATGAA
CGTGACCGAG CACGGCTGAT GTATCTGACA GATATTACGA TTTCTGCCGA GGGACAGGAT
TTACCGACTG GCATGGCATT AGCTGTGGAA CTCGATGTGC AGCCGAAAGT GCAACAAAAA
GTGAAACAGC CATGA
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| Protein sequence | MSSTKGLTML NDQDFSRNRF SKNNSSNKSL SNSSLSSSKL SNSKLSNNKL TNQTALIKRV
ATGVVLGCLL LPLAACTQES PSVLGTVERD RLTLIAPVGE LITQVNVVEG QQVKAGEVLL
TLDSTSANAR LALRQAELEQ AKAKLSEAVT GARLEDIERA KAVLDGANAS VKEAQRAFER
TNRLYATKVL SQADLDTARA ARDTSLAKQA EAEQSLRLLE NGTRSEQLEQ AKAAVAAASA
SVAIEQKALA DLSLVAARDA VVDTLPWRVG DRIAAGTQLI GLLASEDPYV RVYLPATWLD
RVKAGDKVNI RVDGREIPIA GTVRNIRSQP AYTPFYALNE RDRARLMYLT DITISAEGQD
LPTGMALAVE LDVQPKVQQK VKQP
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