| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1481 |
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| Symbol | |
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| ID | 5371328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1789678 |
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| End bp | 1791216 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829680 |
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| Product | transcriptional regulator, TyrR |
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| Protein accession | YP_001365694 |
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| Protein GI | 153000013 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000204273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTGG AAGTCAGCTG TCAGGATCGT GTTGGTTTAG CCAAAGATAT CTTAGTCGTG
TTAGAGCGTT ATGGTATTAA TTTAATTGCC ATTGATGCCA GTAACCAAGG ATTCCTGTAC
TTACAATTTG CCGAAATCAG TTTTGAAACC TTAAGTGCCT TGATGCCGCA GATCCGCAAA
GTGGAAAGTG TCCATGATGT GCGTACGGTT TCGTTTATGC CCTCAGAGCA AGAACATTAC
GCCCTTAAAA CCTTGCTCAA AACCTTACCC GATTCCGTTT TCTCCATCGA TGCTAAAGCG
CGTATCCGTA TCGTTAACGA GTCCGCCTTG CTCAATATCG GTATGGGTGA GCACGAAGTG
CTCGAAGAGT CGCTCAATCA TTGGGTGCAA GGTTTTAACT TCAGCCGCTG GTTGAGCGAA
AGCCAAGTCT TACCGCAAGC GGCGAGGGTA CAAATTGGTC CAAACGAATA TTTAGCCGAA
ATGCTGCCGA TTTACCTGCC CGATGAGGAT GAGAAAACTA TCTTAGTTGG CGCTGTGGTG
TCGCTAAAAT CCCCCGCGCG GGTTGGAAAA CAATTTAACG CGCTGCAGAA TCAAACTACT
GGCTTTGAAA ATGTATTAGC CAGCAGTGAC AAAATGAAGG AAGTGCTTAA GCAAGCGCGG
CGGATGGCCC AGCTCGATGC GCCTTTATTG ATCACAGGTG AAACGGGTAC TGGTAAAGAA
TTAATGGCCA GAGCCAGCCA CGATGCCAGC ATGCGCCGCG AGAAACCCTT TATCGCCATC
AACTGCGCCG CTCTGCCCGA CAGCGCCGCC GAAGAAGAAC TATTCGGTTA TGTCAGTCAG
GGCAAAGTCG TTAAACGGGG TTTCTTTGAA GAAGCTAAAG GCGGCACAGT ATTTCTCGAT
GAAGTGGCTG AGATGTCCAA GGCCGCACAA GTTAAGCTGC TTCGTCTATT GCAAGATGGC
ACCTTTAGAC GTATCGGCGG CGATGAAGAA GTCCGTGCCG ATGTGCGGAT CATTTGCTCA
ACCCAGAAAA ATTTAGCCGA ACTGTGCCAA ACCGGTGAGT TTAGGGAAGA TTTGTACTAT
CGCATCCATG TGCTCAGTTA TCACATACCG TCACTGCGCG AGCGTAAAGT CGATATCATT
CCACTGACAG AAATGTTCCT CGAACATTAC AGCCAACAGT TATCTAGCCC AGTGCGACGG
ATTTCGGCCC AGTGCCGCGA TCATTTGCTC ACCTACGCTT GGCCAGGTAA CGTACGCCAA
TTAAAGAACG CAGTATTTAG AGCTGTGTCT ATGTGGGATG GTTCGGCCGA GTTGACGGTA
GAACAATTAA AACTGCCGTC CTACGCCGAA GGTTTTGGTT ACTTTGACAA TGAGTTTGAA
GGCAATCTCG ACGATGCGAT GAAGCAGTTT GAAGCGAGTC TGTTGCGTCG ATTATATCCA
GCCTATCCGA GTACTCGTCA GTTAGCGAAA AAGCTCGGGG TGTCGCACAC CGCTATTGCC
AATAAGCTGC GTGAGTACAA GATAGCCAAG CGTCGTTAA
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| Protein sequence | MRLEVSCQDR VGLAKDILVV LERYGINLIA IDASNQGFLY LQFAEISFET LSALMPQIRK
VESVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDAKA RIRIVNESAL LNIGMGEHEV
LEESLNHWVQ GFNFSRWLSE SQVLPQAARV QIGPNEYLAE MLPIYLPDED EKTILVGAVV
SLKSPARVGK QFNALQNQTT GFENVLASSD KMKEVLKQAR RMAQLDAPLL ITGETGTGKE
LMARASHDAS MRREKPFIAI NCAALPDSAA EEELFGYVSQ GKVVKRGFFE EAKGGTVFLD
EVAEMSKAAQ VKLLRLLQDG TFRRIGGDEE VRADVRIICS TQKNLAELCQ TGEFREDLYY
RIHVLSYHIP SLRERKVDII PLTEMFLEHY SQQLSSPVRR ISAQCRDHLL TYAWPGNVRQ
LKNAVFRAVS MWDGSAELTV EQLKLPSYAE GFGYFDNEFE GNLDDAMKQF EASLLRRLYP
AYPSTRQLAK KLGVSHTAIA NKLREYKIAK RR
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