Gene Shew185_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1472 
Symbol 
ID5370452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1779832 
End bp1780515 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content45% 
IMG OID640829671 
Producthypothetical protein 
Protein accessionYP_001365685 
Protein GI153000004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00599836 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTG AGTCAGAAAT AATGTCTGTG CGTCCTTTAT CAAAACGAAA TGGGTTAACC 
TTAACTTGGC TGGGTGGCTT AAGTCTGCTG CTGGGTTTGG GACTTTTTCT AACGTGGCCA 
GCCTTGTTTG CCGTGGGGTT GATGTTTTTT AGTTTGGGCG CTATTTCACT TATTCTCGGT 
TTAGCTAAGG TGTATGAGCC GGAAACGACC CTAGCATTAG ATGACAAGGG GCTGACCTAT 
TTTCATCGCC GCGGCAAAGT GTCTATCGGT TGGGATAATA TTCAAAGGGT CGATATCCCG 
CGGGTGACTA ATGGATTAGA TACCATAGAG TTATCTTATT TAGGCATTAA GCTAAAACAC 
TTAAATCCTA TTTTGGATAA TATCTCCCTG CGCTTAGCCA CCGGCTTATT AACAGAGCAG 
CGGCCTTTAT TGGTGACTGC AGCCTCGCAA GATGAAGACT TAGCGACTTT AGAAACTTAT 
CTCGGCGCAG AGTTTGGTCC TTTGGTGATA GAAGGGGATC GTTATCGCGG TGTATTGGCG 
ATGTTTGGGC ATCGCTGCGT GATGTTAGAT ACGCGTTTAG GTTATCACTT GTATATTCCC 
CACGACAGTT TGGACAGAGA AGCTAAGGAC TTTATCAAGC TGCTTAGGCA ACGTATTGCA 
CAAGCCAGTC GCTTAGCGGA TTAA
 
Protein sequence
MTIESEIMSV RPLSKRNGLT LTWLGGLSLL LGLGLFLTWP ALFAVGLMFF SLGAISLILG 
LAKVYEPETT LALDDKGLTY FHRRGKVSIG WDNIQRVDIP RVTNGLDTIE LSYLGIKLKH 
LNPILDNISL RLATGLLTEQ RPLLVTAASQ DEDLATLETY LGAEFGPLVI EGDRYRGVLA 
MFGHRCVMLD TRLGYHLYIP HDSLDREAKD FIKLLRQRIA QASRLAD