Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1436 |
Symbol | |
ID | 5373066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1734069 |
End bp | 1734932 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829635 |
Product | pseudouridine synthase |
Protein accession | YP_001365649 |
Protein GI | 152999968 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAG ATGATATCTG GCTTGAAACG CCTGAAAATG CACTGAATGC ATCCCAAGAG GATGACTCAG AAGAGCAGGC GCCTGAGATT GAAATTCTTT ATGAAGATGA GCACTTAGTG GCAATTCATA AACCTGCAGG CTTATTGGTC CACCGCAGTT ATTTAGCGCG TCGGGAGCGA TTTTTTGCCA TGCAGCTGAC CCGCGACTTA GTCGGCTGTC ATGTGTTCCC TGTTCATCGT CTCGACAGGC CGACATCTGG CGTGCTTTTG TTTGCCAAGA GCAGCGAAGT CGCCAATGCA CTGTGTGAGC AATTTGCCTC CCATACGATT GAAAAACAAT ATTTGGCTTT AGTGCGCGGC AATATGCATG AGAGCGGTAT TTTAGACTAT GCGCTTAAGG TTGAGTTGGA TGAATTAGGC GATAAGAATG CCGATCCCAA CAAAGCCGCG CAGGAAGCTG TGACGGCTTA TGAGCCATTA CTCAATACTG AAATTCCGTA TCCCTCGGGC CGATATCCCA CTAGCCGATT TGCACTGGTA CGCTTGAGCC CTAAAACGGG GCGTAAGCAT CAGCTTAGAA GACATATGGC GCATTTACGT CACCCTATTG TCGGTGATAC CACCCATGGT GACGGTAAGC AAAATGCGTT TTTCCGCGAG CATTTTGGCA TTAATCGCCT GTGGCTTATC GCGAAAAAGC TCAGCTTCAC CCATCCAGTG ACTCAAGTTC GGCTCAGTAT AGAAACTGAG CTCGAGCCTC AGTGGGAAAC CGTGTTTGCC GAGCTAGGTT GGGACGAGGC GACCTTAAGT CAACAGGCTG AGTTGTTAAT CGCCACGGAT GAAATACCAG CTGGAAATGC GTAA
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Protein sequence | MNQDDIWLET PENALNASQE DDSEEQAPEI EILYEDEHLV AIHKPAGLLV HRSYLARRER FFAMQLTRDL VGCHVFPVHR LDRPTSGVLL FAKSSEVANA LCEQFASHTI EKQYLALVRG NMHESGILDY ALKVELDELG DKNADPNKAA QEAVTAYEPL LNTEIPYPSG RYPTSRFALV RLSPKTGRKH QLRRHMAHLR HPIVGDTTHG DGKQNAFFRE HFGINRLWLI AKKLSFTHPV TQVRLSIETE LEPQWETVFA ELGWDEATLS QQAELLIATD EIPAGNA
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