Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1402 |
Symbol | |
ID | 5372069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1688629 |
End bp | 1689756 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829601 |
Product | polysaccharide deacetylase |
Protein accession | YP_001365615 |
Protein GI | 152999934 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTGA AATCGATAGC CGCCGCAGTT GGACTTTGTT TAGCGAGCTT AAGTGTTGCC CATGCCAGCG ATAAAACCAT TTACCTCACC TTTGATGATG GTCCAATTGA TGCGACCTTA GGACTGTTAG ATGCCTTAAA AGACGCCAAT ATCAAGGCGA CGTTCTTTAT CAATGCTTTT CATATGTATG GCGAAGGGGA TGAAAACGAA GCGTTGGCGG CTGTCGCCTT ACAACGTTTG CTAGACAATG GTCATATTCT GGCAAACCAC AGTTACGATC ATATGCTGCA TAACTGCACC GATGGTGTGC AATCGGGGGC AGTTTATTGC AATCAAGTGG GTCTCTGGCC AGTTAAATCC TATCAAGATG CGGCTACCGA CTTTACCTAC TTTGTGACGA ATACCGCCAA AGTGGTTGAA CTTATTCCTA ATGCCGCCAG TTATCCCAAC AACAAGATGA CTAAGTTGGC GCGTTTGCCC TATACCAATG GCTGGCGAGT GAGCAGTAAA CTCAAAGGCG ACGGTTTGTG TGCCACCTCT GATACTGTGC CGCCTTGGGA CCCCGCTTTT GCTTGTACTG CTGAAACCTC TACCAACAGT TCGCAAGTTG CGGTGCAAAT TCAAAACATG CTCGCCGAGA GTGACTATAA GATATTTGGT TGGGACTTTG ATTGGGGGCC AGAGGATTGG GGCGTGGCTT TTCCCGCTGA ATCTATGGCC GATGGGGTTG AGCTGGTGGA TAAAATCAAT CAAGTGATCA ACACCTGTGC TGGCACCACA ATGAACCCTC TTAACAGTCG TACTCAGAAC TTAGACTGTA GCGATGGTTT GCACGACGGT AAAGTGGTGA TCTTGACCCA CGACTTCCTG TTTGAAAATG CCCACCGTGG TCAAGGTGCG ACCATCAACT TGCCTAAAAT TAAACGCTTT GTGGAAGAGG CGCAGCGCCA AGGATACCGT TTCGACACGC TAGATAACTA TGCCCCCGCT TGGCAGGATC AGCATGATTA TCAGCAGCCT GATTTTGTCT CGTATCAAGA TAAAATCTAT TCCTTAGTGC AAGCCCATTT CTCCCAAAGT AATTGGCAAC CGAACCAAAC CCCAGCCTTG TGGAAAAACG AGAAGTAG
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Protein sequence | MKLKSIAAAV GLCLASLSVA HASDKTIYLT FDDGPIDATL GLLDALKDAN IKATFFINAF HMYGEGDENE ALAAVALQRL LDNGHILANH SYDHMLHNCT DGVQSGAVYC NQVGLWPVKS YQDAATDFTY FVTNTAKVVE LIPNAASYPN NKMTKLARLP YTNGWRVSSK LKGDGLCATS DTVPPWDPAF ACTAETSTNS SQVAVQIQNM LAESDYKIFG WDFDWGPEDW GVAFPAESMA DGVELVDKIN QVINTCAGTT MNPLNSRTQN LDCSDGLHDG KVVILTHDFL FENAHRGQGA TINLPKIKRF VEEAQRQGYR FDTLDNYAPA WQDQHDYQQP DFVSYQDKIY SLVQAHFSQS NWQPNQTPAL WKNEK
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