Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1379 |
Symbol | |
ID | 5372686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1661525 |
End bp | 1662115 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640829578 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001365592 |
Protein GI | 152999911 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGAA GTTGTAATTT TGATCGGCGG GAAAAACTCA TATTGGCAAT GGAGCTTTTT TGGCAAAAGG GCTTTGCCGA AACCTCGATT TCCGATCTCG TCGGCCATTT AGCCATTAAT CGATTTAGCC TTTATAACAG TTTCGGCGAC AAGCAAAAGC TATACCGCGA GTGCCTCAGT TTCTACCTCG ATAACTACTC CTTTGGCGCC TCAGATACCC TGCTGCATGA AAAAGCAGGC TTGGCCGAAA TAGCAGCTTA TCTAGCCCGC TTTGTTGCCC TGCAGAGGGA ACAAAAATAT GGCTGTTTTA TGCAAAATGC CGTATTAGAA AAGAGCCTCG ACGATGAGAG TGTGCTGCAG GAATGTCAGC GCTTATTTTG CCGATTACAG GCCTCATTCA CCCAAGTGTT GTTGGACTGC CAAGCGCGAG GCGAGTTATT GGCCAATTTA CAGCCGCATC AGGTCGCTGC ATTTTTAGTA CTGCAATTAC AAGGAATTAG AGTGTTAGGT AAAGCGGGTG AATATGAACT GCTAGACAAT GCATTCGCAG TATTGCAGGG CTACTTAGGC AGTTTAAATA CAAAAGTTTA A
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Protein sequence | MARSCNFDRR EKLILAMELF WQKGFAETSI SDLVGHLAIN RFSLYNSFGD KQKLYRECLS FYLDNYSFGA SDTLLHEKAG LAEIAAYLAR FVALQREQKY GCFMQNAVLE KSLDDESVLQ ECQRLFCRLQ ASFTQVLLDC QARGELLANL QPHQVAAFLV LQLQGIRVLG KAGEYELLDN AFAVLQGYLG SLNTKV
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