Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1344 |
Symbol | |
ID | 5370084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1616641 |
End bp | 1617522 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829543 |
Product | polyprenyl synthetase |
Protein accession | YP_001365557 |
Protein GI | 152999876 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00140947 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAGTCA GTGCCATTCA AGAATATCAA CAACGGGTTG ATAATCAATT AAAACAGCGT TTTAGTACGC TTGAAGATAC TGCTCCCCAA TTAAAGGCCG CCATGACTTA CGGCGCCTTA TTGGGTGGCA AACGCATTCG ACCTTTCCTT GTATACAGTG TCGGACGCAT GTTTGGGGTC GAGCTCGAAA AATTAGATGC TTGCGCCGCA GCCATTGAAT GTATCCATGC TTATTCATTG ATCCACGACG ATTTACCCGC CATGGATGAT GATGAGCTGC GCCGTGGTCA GCCCACAGTG CATATCGCTT TTGATGAAGC GACCGCCATT TTAGCTGGGG ATGCACTGCA GACCTTAGCC TTTGAAATTG TCACCGAAGC GGTACCTGGG ATCAGCAGCG AGCAACATAT CGCTATGGTC AGAGTATTAG CAAAAGCCTC AGGTTATCGT GGCATGTGTG GCGGCCAAGC GATAGACTTA GCCTCAACCG ATAAACATAT TGATCTTAAA GCATTAACTC AGTTACATAA TATGAAAACG GGCGCCCTTA TCAGTTGCGC CGTTGAGTTA GCATTAATCG CCGCAAACGC GCCAAAAGAT CAGTATGCTG CTATGATGGA TTTTGCCCGT GCGGTCGGAC TCGCCTTCCA AGTACAAGAC GATATCCTCG ACATCGTAGC CACCACCGAA GAACTCGGTA AGCCGCAAGG CTCTGATACT GAATCGAATA AGAGTACGTT TCCACAACTA CTTGGACTAC AAGGTGCACA AGACACCGCC AAACAACTGA TCCAAGAGGC ACTATCAGCG CTGGCTAAAT TGCCATACAA TAGCCAGTTA ATTGCAGACT TCGCCCGCTA TATCATTGAG CGAAGAATAT AA
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Protein sequence | MLVSAIQEYQ QRVDNQLKQR FSTLEDTAPQ LKAAMTYGAL LGGKRIRPFL VYSVGRMFGV ELEKLDACAA AIECIHAYSL IHDDLPAMDD DELRRGQPTV HIAFDEATAI LAGDALQTLA FEIVTEAVPG ISSEQHIAMV RVLAKASGYR GMCGGQAIDL ASTDKHIDLK ALTQLHNMKT GALISCAVEL ALIAANAPKD QYAAMMDFAR AVGLAFQVQD DILDIVATTE ELGKPQGSDT ESNKSTFPQL LGLQGAQDTA KQLIQEALSA LAKLPYNSQL IADFARYIIE RRI
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