Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1332 |
Symbol | |
ID | 5369868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1597360 |
End bp | 1598715 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829531 |
Product | multi anti extrusion protein MatE |
Protein accession | YP_001365545 |
Protein GI | 152999864 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.478618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCAA TAACATCTAA TCATGCTCCT GCGGATATGA GCCTGCTCGA GGAGCCGATT GCGAAGCTTT TTTGGCGCTA TACCATACCC ACCATTGCCT CTATGTTGGT GACGGGCGTC TATGTGACGA TTGATGGCAT CTTCGTTGGC CACTATTTGG GTGAAACTGG GCTGGCGGGG ATGATGTTAG CCTATCCAGT CGGCGCTATT TTGTATGCGA TTGGCGCTAT GATAGGCATG GGCAGCGCCG CATTAGTGTC GATCAACCTT GGTCAAGGCA ATGTGGCTAA GGCTCGTAAA TTGCTCGGTA ATGCCTTTAG TTTGTGTTTA TTGGCGGGAG CCATTTTTGC CCTCATGGGT GGGATATTCT CGCGGGATAT TTTGATCGCC CTCGGGGCGC AGGGGGACAT TCTCGAAAAC GCCAACGAAT ATCTGTTCTG GTATTTTGCC CTGTGTCATT TCCCCATTAT TTCAATGACC TTCACCACAT TGCTGCGTAA TGACGGTCGG CCATCTATGG TGACTTGGGT GTTGATCTTG GGCGGTGTAT TAAACACTTT CTTAGATTGG CTATTTATTG TGGTCTTCCC CTTTGGTTTA GCGGGCGCTG CGATTGCGAC TATGATGTCG CAGGCGGTGA CTGGGCTTTT GTGTTTGCAG CATTTTTTCA GTCCTCGGAC TCAGTTGAGG ATCGACCTTG AGCAGATGAA GCTTAAGCTC GACAATTGCT TGAACATAGC CCGCGTGGGT TTACCCAGCT TTTTGATGAA CCTTTATTTA TCGATAGTGT TAACCCTACA CAACACAGCT TTTTTGTGGG TGGGCGGCCC CTTACACGTG GCAGCCTATG GCGTAGTCAG TTACACAGAA GCATTCTTCT ATTTGATTTT CGAAGGTATT GCCCTCGGCA CGCAGCCAAT TTATAGCTTT AATGCGGGCG CTGGGCGTTT CGATCGAGTT AAGCAAGCAC GTAATATTGC CTTTGGCATG ACGCTGCTCA CCGCAGTGTT GGGCTTAGCG CTGATTTATT CTCGCCCTGA ATGGCTAGTG TATTTGTTTG CTGGCGATAA TCAGAACCTA ACGCCCGTGG CGATTGAAGG TATGCGCTGG TATTTCTGGG GCTTACCAAT GGAAGGTTTA ATCTTAGTCG GTGCGAGTTT CTTCCAAGCG ATTAATTGCT CGAAACAAGC CTCTATGCTG ACCGGCGCGA AACTTATCCT GATCGCTGCG ATTATCTACT GCTTCGCTTG GATGTTCGGT GTGATTGGTG TGTGGGTATC GCTCGCAACC TGTAGCACTA TTCTGACGAT ATGGATGTTC TACGCCATGA AGCGAGTCGA GGCGCGGCTG CAATAA
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Protein sequence | MTAITSNHAP ADMSLLEEPI AKLFWRYTIP TIASMLVTGV YVTIDGIFVG HYLGETGLAG MMLAYPVGAI LYAIGAMIGM GSAALVSINL GQGNVAKARK LLGNAFSLCL LAGAIFALMG GIFSRDILIA LGAQGDILEN ANEYLFWYFA LCHFPIISMT FTTLLRNDGR PSMVTWVLIL GGVLNTFLDW LFIVVFPFGL AGAAIATMMS QAVTGLLCLQ HFFSPRTQLR IDLEQMKLKL DNCLNIARVG LPSFLMNLYL SIVLTLHNTA FLWVGGPLHV AAYGVVSYTE AFFYLIFEGI ALGTQPIYSF NAGAGRFDRV KQARNIAFGM TLLTAVLGLA LIYSRPEWLV YLFAGDNQNL TPVAIEGMRW YFWGLPMEGL ILVGASFFQA INCSKQASML TGAKLILIAA IIYCFAWMFG VIGVWVSLAT CSTILTIWMF YAMKRVEARL Q
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