Gene Shew185_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1328 
Symbol 
ID5369665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1592408 
End bp1593514 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content47% 
IMG OID640829527 
Productcobalamin synthesis protein P47K 
Protein accessionYP_001365541 
Protein GI152999860 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATCA AAGCGATTCC CACCAATATC ATCACAGGTT TTTTAGGCGT AGGTAAAACC 
TCTTTGATTA AACAATTGCT GGCGACTAAA CCCGCGGATG AGATTTGGGC TGTGCTGGTC
AATGAGTTTG GTGAGGTCGG CATTGATGCG GGGTTACTGA ACTCCTCCGA TAACGGCATA
CAAATTCGTG AGGTTGCGGG TGGCTGTATG TGCTGCGCCG CGGGCGTGCC GACGCAAGTG
GCGATCAATC AGTTGATTGC GAAAGCAAAA CCTGATCGCT TATTGATAGA ACCAACTGGG
CTTGGGCATC CTAATGAAAT CATTAAAGTA TTGAGTGCAC CCCATTATCA GAATGTGATT
TCACTGCGCA GTACTTTATG TTTGGTGGAC GCGCGTAAAA TCCACGATCC TCGCTATCGC
GAACATGCAA ACTTCATCCA ACAGCTGCAA GTGGCCGATG TGATTATCGC GACTAAGTCG
GATTTATATG ACGCTGAAAA TACTAAGTTA CTCTATGAGT TACAGACCTA TTTAAGTCAT
ATCGAGCGCA CTGATATTCC TGTTGTGAGC CACACTAACC AGCAACCTTT ACCTAGCGCG
CTACTGGATT ATTTAAACCA ACCAAGGCGC GTGTCACTCA ATATGAGCAG TAATGGTGGC
ATAGTCCCTA AGCTAGGTAA TCTTATAACG ACTGCTCCTA GCTTGTTCCG CACGGGTGGT
TCGCGTTTGA GTGAGCTAAG CCTCTTTGCC GAAGGTGCAA TCGAAGTCGC ACTCGAATTT
GATGCACGCG GCATAGTGCG CAAGCAGAAT CAAGGCGAAG GCTGTTTTAG CTGTGGCTGG
GTGTTTGATC CAAGGCAAGA GTTTGATTTC GATAAATTAA TGGCATTTAT TCAGCGCCAC
ACTCAGTTAT CAGATGTCGG GCAAGTGTTG CTGAGATTAA AGGCCGTGAT GATCACCTCT
GAGGGCATCG CCGGATTTAA CTGGATTGAT CATGAGTTTA CTGTGGTTGA ACTCGATGAC
AGCTTAGATT CCAGACTAGA GATGATTACC ATGGACGAAG TCAATTGGGA CGAGATTGAG
CAGCAGTTGC TCGCCTGTCT TTGCTAA
 
Protein sequence
MIIKAIPTNI ITGFLGVGKT SLIKQLLATK PADEIWAVLV NEFGEVGIDA GLLNSSDNGI 
QIREVAGGCM CCAAGVPTQV AINQLIAKAK PDRLLIEPTG LGHPNEIIKV LSAPHYQNVI
SLRSTLCLVD ARKIHDPRYR EHANFIQQLQ VADVIIATKS DLYDAENTKL LYELQTYLSH
IERTDIPVVS HTNQQPLPSA LLDYLNQPRR VSLNMSSNGG IVPKLGNLIT TAPSLFRTGG
SRLSELSLFA EGAIEVALEF DARGIVRKQN QGEGCFSCGW VFDPRQEFDF DKLMAFIQRH
TQLSDVGQVL LRLKAVMITS EGIAGFNWID HEFTVVELDD SLDSRLEMIT MDEVNWDEIE
QQLLACLC