Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1327 |
Symbol | |
ID | 5369664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1590770 |
End bp | 1592188 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829526 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001365540 |
Protein GI | 152999859 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTG AAACACTCGG TTTATCTTCT CCTATTTTGA ATGCGATAAC TGAGTGTGGC TATCAGCAAC TCACTCAAGT GCAAGAGAAA GTGATCCCGC TTGCCTTTGA AGGCAAAGAC ATTATGGCCT GCGCCCAAAC GGGTACAGGT AAGACGGCTT CCTTTGCTCT GCCTGTACTT GAAAAGCTGG CGGCTGAGTC TTTAACAAGC GACAGCAATG ATAAACCGAT TTTACGCGCG TTGGTGATGA CTCCCACCCG CGAACTCGCG ATCCAAGTCT GCGAAAATAT CCAGAAATAC AGCCAGTTCC TGCCACTGAA AACCTTAGCT GTTTACGGCG GCGCCAACAT GAATCCCCAG CGTAAAGGGG TAGAGCAGGG CGTTGATATT TTGGTGGCAA CCCCAGGTCG TTTATTCGAT ATTATCGGCC AATTCCAGTT AGATCTGTCG AGCGTCACGA CCTTAGTGAT CGACGAAGCC GACCGCATGT TAGACATGGG CTTTGTGCGC GACATTGAAA AAGTGAAACG CTTAATTGCG CCGCAGCATC AAACCATGTT GTTTTCAGCG ACCTATAGCG ATGCGGTGAA ACAACTCGCA GAGAAAATGC TGAATGAACC TCAGTGGGTG AATGTTGCCG ATACGACAAC GGCATCTACA GTAGTGCAGG AAGTGTATCG CGTTGATAAA CGTCGCAAAG CCGAGCTGTT GTCAGAACTC GTTGGCCGCA ACAATTGGCG TCAAGTGTTG GTTTTTGCCA GCACGAAAGA AAGCGCCGAG CATTTATTGC AAGAATTAAA GCTTGATGGC ATAGCCGCAG GCGTGTTCCA TGGTGATAAA ACTCAAGGCG CCCGTAATCG GGTGTTAGAA GAGTTTAAAG CCAGTAAATT ACGGGTGCTG GTGGCAACCG ATGTGGCTGC ACGTGGGTTA GACATTCATG CCTTGCCTAT GGTGATCAAC CTTGAATTAC CTTTCCTCGC CGAAGATTAT ATCCATCGTA TTGGTCGTAC AGGCCGTGCT GGATTAACCG GTCGCGCGAT TTCGTTCGTG TCACCTTCAG ACGATGAAAT GCTCGCTGAA ATTGAAGCCT TGATTGAGCA AAAACTGCCT GTGTCGGTAC AACCGGGTTA TGAAGAAGGC ACGCCTTTAC CTGCCCGCTA CCGTGATGCG CCAGCGGCAC CGATTAAGCC GATTGGAAAG TGGAGCCATA AGGCGCCGCA GGATCGCACT ATTGGTCAGT CTCGTCAGGG TAAGTACGCT AAAGGTAAAG CGCAGGACAG CAAAGCAGGT GGCGATAAAT CCTCTAGCCG TGCCAAACCT GCGTCAGGCT CAGGTAAGCC GTTTAATGCG ACTAAACCTA AGTCGAATTT GGTGAGCAAT AAGTCAGGTT TTGGTTCTCG CGCAAATAAG TCTAAATAA
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Protein sequence | MKFETLGLSS PILNAITECG YQQLTQVQEK VIPLAFEGKD IMACAQTGTG KTASFALPVL EKLAAESLTS DSNDKPILRA LVMTPTRELA IQVCENIQKY SQFLPLKTLA VYGGANMNPQ RKGVEQGVDI LVATPGRLFD IIGQFQLDLS SVTTLVIDEA DRMLDMGFVR DIEKVKRLIA PQHQTMLFSA TYSDAVKQLA EKMLNEPQWV NVADTTTAST VVQEVYRVDK RRKAELLSEL VGRNNWRQVL VFASTKESAE HLLQELKLDG IAAGVFHGDK TQGARNRVLE EFKASKLRVL VATDVAARGL DIHALPMVIN LELPFLAEDY IHRIGRTGRA GLTGRAISFV SPSDDEMLAE IEALIEQKLP VSVQPGYEEG TPLPARYRDA PAAPIKPIGK WSHKAPQDRT IGQSRQGKYA KGKAQDSKAG GDKSSSRAKP ASGSGKPFNA TKPKSNLVSN KSGFGSRANK SK
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