Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1292 |
Symbol | |
ID | 5371554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1537536 |
End bp | 1538117 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829490 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001365505 |
Protein GI | 152999824 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAATG CAGAGTTCGA CCGAGAACAG GTACTTCGCG GCGCGATGGC CGCCTTCATG CACAAGGGTT ACACCAAAAC AAGCATGCAA GATCTAACTC AAGCCACGGG ATTACATCCG GGGTCGATTT ACTGCGCTTT TACCAATAAA CGCGGCTTAC TAATCGCGGC CATTGAGCAA TATCAACTCG ACAGAAATCA GCAATTTACC AGCCTGTTCG CCAATAGCAA AAATGTACTA ACGAACTTGA AAACTTATTT AGATCATATT GTTGCCGAAT GCCTAAGTTG TGATAGCGCC CAAGCTTGTT TATTGACGAA GGCATTAAAT GAAGTGGCTG AGCAAGATGT TGAGATTAGA GACATCATCA ATCAGTATCT GCAATCTTGG CAGCAAGCGC TAACGCAGCA GTTTACCAGC GCAGCCAAGC AAGGACTGCT AGAAGGTCAT CGCAGCGACG AGCAAAGAGC CCAATATTTT ATGATGGGAA TTTATGGTTT AAGGACCTTC GCTCACACCC ATCCAAATGC CGAAACCCTT CAACATCTTG CCGATCGATT ACTAACTGAA GTCTGCCATT AA
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Protein sequence | MRNAEFDREQ VLRGAMAAFM HKGYTKTSMQ DLTQATGLHP GSIYCAFTNK RGLLIAAIEQ YQLDRNQQFT SLFANSKNVL TNLKTYLDHI VAECLSCDSA QACLLTKALN EVAEQDVEIR DIINQYLQSW QQALTQQFTS AAKQGLLEGH RSDEQRAQYF MMGIYGLRTF AHTHPNAETL QHLADRLLTE VCH
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