| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1253 |
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| Symbol | |
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| ID | 5371673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1493063 |
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| End bp | 1494436 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829452 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001365467 |
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| Protein GI | 152999786 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000179157 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAGA ACCTAACCGA CAGACTGTCA CGCACACTGA AAAATATCAG TGGCCGTGGT
CGCTTAACTG AAGAAAACGT TAAGGAAACC CTGCGCGAAG TGCGTATGGC ACTGCTGGAG
GCCGATGTTG CCCTGCCTGT GGTGCGCGAA TTCGTTAATA ATGTAAAAGA ACGTGCCGTT
GGCCAAGAAG TCTCTAAAAG CTTAAGCCCT GGTCAAGCCT TCATTAAGAT AGTTCAAAGT
GAACTTGAAA AATCCATGGG CGAGGCGAAT GAAGCCTTAG ATTTAGCCAC TCAGCCGCCA
GCCGTGATCA TGATGGCGGG TCTGCAAGGT GCGGGTAAAA CCACCAGTGT GGCCAAACTG
GGTAAATTTT TACGCGAACG CCATAAAAAA TCGGTATTGG TGGTCAGTGC CGACGTTTAC
CGCCCTGCGG CGATTAAACA GCTTGAGACG TTAGCGCAAG AAGTCGCGGT GGAGTTTTTC
CCCTCAGACG TCAGCCAAAA GCCAATCGAC ATTGCGAAAG CGGCGATTGC CCACGCTAAA
TTAAAGTTCA TCGATGTGGT GATCCTCGAT ACCGCGGGTC GTCTGCACGT CGACGAAGCC
ATGATGGACG AGATCAAAGG CTTACACGCT GCGGTCAAGC CTATCGAGAC CTTGTTCGTT
GTGGATGCTA TGACAGGTCA AGATGCGGCG AACACGGCTA AGGCGTTTAA TGAAGCTTTA
CCACTGACAG GGGTTATCTT AACCAAAGTC GATGGTGATG CGCGCGGTGG TGCAGCGTTA
TCGATTCGCC ATATTACCGG CAAGCCGATT AAATTCCTCG GTGTCGGTGA AAAGACCGAC
GCGTTAGAAC CGTTCCATCC CGATCGTATT GCCTCGCGTA TTTTGGGTAT GGGCGATGTG
TTATCGCTGA TCGAAGAAGT TGAGCGCGGC GTCGATAAAG AAAAGGCCAT GAAACTGGCT
TCGAAAGTGA AGCAGGGTGG CAGTTTTGAT TTAGAAGATT TCCGTGAGCA GTTACAGCAA
ATGAAAAACA TGGGCGGCAT GATGAACATG CTGGAAAAAC TGCCCGGTGT AGGTCAATTG
CCCCCAGAAG CCTTAGCGCA AATCCAAGAC GGCAAGATGA CAGGCCAAAT GGAAGCCATC
ATTAATTCGA TGACGTCCAA AGAGCGTAAG AACCCTGATT TAATCAAGGG CTCACGCAAG
CGTCGTATTG CTGCGGGTTC TGGCACGCAA ATCCAAGACG TAAACCGTTT ATTGAAACAG
TTTACGCAAA TGCAAAAGAT GATGAAAAAA ATGTCTGCTA AGGGCGGCAT GCAAAAAATA
ATGCGCGGAA TGCGTGGCAT AATGCCGCCT GGAATGAAAT TTCCAGGCCG TTAA
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| Protein sequence | MFENLTDRLS RTLKNISGRG RLTEENVKET LREVRMALLE ADVALPVVRE FVNNVKERAV
GQEVSKSLSP GQAFIKIVQS ELEKSMGEAN EALDLATQPP AVIMMAGLQG AGKTTSVAKL
GKFLRERHKK SVLVVSADVY RPAAIKQLET LAQEVAVEFF PSDVSQKPID IAKAAIAHAK
LKFIDVVILD TAGRLHVDEA MMDEIKGLHA AVKPIETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVILTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV
LSLIEEVERG VDKEKAMKLA SKVKQGGSFD LEDFREQLQQ MKNMGGMMNM LEKLPGVGQL
PPEALAQIQD GKMTGQMEAI INSMTSKERK NPDLIKGSRK RRIAAGSGTQ IQDVNRLLKQ
FTQMQKMMKK MSAKGGMQKI MRGMRGIMPP GMKFPGR
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