| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1241 |
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| Symbol | |
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| ID | 5372469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1481681 |
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| End bp | 1482613 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640829440 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_001365455 |
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| Protein GI | 152999774 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00476575 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTCTAA TCCTGTTGGC TTTATTAGCC TTGGTCTTTC CTGCGATGGC GCAGGAAGAT
ATGCCTGCCA AAGTCTGGCT CGAGAAAATG AGTCAGGCCT TACGAGAGAA AGAGTTTAAA
GCATCGATTA TTCAACTTCA GGCCGATCAT ATTCGGCCTT TGGTTTACCT GCACGGTAAG
GTGAATAATC AAGAAGTTGC CTTTCTAGAA TACCTTAACG GTCCACCTAA AAATGCTGTG
CGTGTCGGCA ACCGTGTCAC CTTTATTGAG CACGACGAGC CTGCATACAG TATTGTTTCT
AATCATATCC AAGGTGTTTG GCCTGCCGCT TTTTCTGCCA ATATGGCGGA TTTAGAAGTG
GGTTATCAGT TTGTGCTTGG TGGTCGCACC CGTATTGCTG GGCGCCCGGG GCAAATGATC
CGCCTGTTGC CCAATGATGA ATTCCGTTAT GGCTTTCAAA TTTGGCTTGA TATGGAAACT
TATCTGCCGC TGCGATACGA CATGCTGACT CAAGATAAGC AATTGCTTGA GCAGATCATG
GTGATTGAAC TCATCGAATT CAGCGAGCCG CCAGCCATTT TGCAAGAAGC CTATAAGCAA
GAATGGCCTG CAGTTATCGA TCAAGCCGAG CGCCAAGACG GTCAAAACTG GCAATTTGCT
TGGTTACCCG CAGGTTTTAC TGTGGTCGTG CGTGATCACC ATAGATTGAT TGGTAGCCAT
GAGGCGGTGG AATACATAGC ACTAACTGAT GGGCTAGCGA GTATCTCCGT TTATGTTGCG
AGAGCAAGTA CAAGTCCATT GCCTGAGGAG TTAATCACCC GTAATGGTTT GTCGTTAGTC
TCAGAAAAAG TGGGTAATGC CGAAGTGGTT GCTGTGGGTA AAGTGCCGAC AGAAACTCTA
ACGCGCATTG CTAAAAGTCT GACGCTAGAA TAG
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| Protein sequence | MRLILLALLA LVFPAMAQED MPAKVWLEKM SQALREKEFK ASIIQLQADH IRPLVYLHGK
VNNQEVAFLE YLNGPPKNAV RVGNRVTFIE HDEPAYSIVS NHIQGVWPAA FSANMADLEV
GYQFVLGGRT RIAGRPGQMI RLLPNDEFRY GFQIWLDMET YLPLRYDMLT QDKQLLEQIM
VIELIEFSEP PAILQEAYKQ EWPAVIDQAE RQDGQNWQFA WLPAGFTVVV RDHHRLIGSH
EAVEYIALTD GLASISVYVA RASTSPLPEE LITRNGLSLV SEKVGNAEVV AVGKVPTETL
TRIAKSLTLE
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